Gene : Carub.0007s2874 C. rubella v1.1
Defline:  (1 of 2) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Genomic Order:  2874
Name:  ? Carub.0007s2874 Secondary Identifier:  ? PAC:39232042
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6545 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7206 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2874 0.5kb upstream 0.5kb upstream 2264 true scaffold_7: 11007522-11009785 Capsella rubella
Carub.0007s2874 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11007522-11008021 Capsella rubella
Carub.0007s2874 0.5kb downstream 0.5kb downstream 2264 true scaffold_7: 11008022-11010285 Capsella rubella
Carub.0007s2874 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11009786-11010285 Capsella rubella
Carub.0007s2874 1.0kb upstream 1.0kb upstream 2764 true scaffold_7: 11007022-11009785 Capsella rubella
Carub.0007s2874 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11007022-11008021 Capsella rubella
Carub.0007s2874 1.0kb downstream 1.0kb downstream 2764 true scaffold_7: 11008022-11010785 Capsella rubella
Carub.0007s2874 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11009786-11010785 Capsella rubella
Carub.0007s2874 2.0kb upstream 2.0kb upstream 3764 true scaffold_7: 11006022-11009785 Capsella rubella
Carub.0007s2874 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11006022-11008021 Capsella rubella
Carub.0007s2874 2.0kb downstream 2.0kb downstream 3764 true scaffold_7: 11008022-11011785 Capsella rubella
Carub.0007s2874 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11009786-11011785 Capsella rubella
Carub.0007s2874 5.0kb upstream 5.0kb upstream 6764 true scaffold_7: 11003022-11009785 Capsella rubella
Carub.0007s2874 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11003022-11008021 Capsella rubella
Carub.0007s2874 5.0kb downstream 5.0kb downstream 6764 true scaffold_7: 11008022-11014785 Capsella rubella
Carub.0007s2874 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11009786-11014785 Capsella rubella
Carub.0007s2874 10.0kb upstream 10.0kb upstream 11764 true scaffold_7: 10998022-11009785 Capsella rubella
Carub.0007s2874 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 10998022-11008021 Capsella rubella
Carub.0007s2874 10.0kb downstream 10.0kb downstream 11764 true scaffold_7: 11008022-11019785 Capsella rubella
Carub.0007s2874 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11009786-11019785 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335338 5261 Brassicaceae Singleton cluster - no MSA
123841590 5264 Brassicales-Malvales View MSA
124339466 5266 SBM View MSA
124239860 5268 Malvidae View MSA
124065206 5270 Rosid View MSA
123737786 5271 Pentapetalae View MSA
122787443 5272 Eudicot View MSA
122044439 5273 Angiosperm View MSA
121346203 5274 Embryophyte View MSA
123426243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain