Gene : Carub.0007s2413 C. rubella v1.1
Defline:  (1 of 1) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  2413
Name:  ? Carub.0007s2413 Secondary Identifier:  ? PAC:39234780
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ANAEROFRUCAT-PWY Capsella rubella pathologic  
Crubella PWY-5481 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2413 0.5kb upstream 0.5kb upstream 2072 true scaffold_7: 9144437-9146508 Capsella rubella
Carub.0007s2413 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9146009-9146508 Capsella rubella
Carub.0007s2413 0.5kb downstream 0.5kb downstream 2072 true scaffold_7: 9143937-9146008 Capsella rubella
Carub.0007s2413 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9143937-9144436 Capsella rubella
Carub.0007s2413 1.0kb upstream 1.0kb upstream 2572 true scaffold_7: 9144437-9147008 Capsella rubella
Carub.0007s2413 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9146009-9147008 Capsella rubella
Carub.0007s2413 1.0kb downstream 1.0kb downstream 2572 true scaffold_7: 9143437-9146008 Capsella rubella
Carub.0007s2413 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9143437-9144436 Capsella rubella
Carub.0007s2413 2.0kb upstream 2.0kb upstream 3572 true scaffold_7: 9144437-9148008 Capsella rubella
Carub.0007s2413 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9146009-9148008 Capsella rubella
Carub.0007s2413 2.0kb downstream 2.0kb downstream 3572 true scaffold_7: 9142437-9146008 Capsella rubella
Carub.0007s2413 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9142437-9144436 Capsella rubella
Carub.0007s2413 5.0kb upstream 5.0kb upstream 6572 true scaffold_7: 9144437-9151008 Capsella rubella
Carub.0007s2413 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9146009-9151008 Capsella rubella
Carub.0007s2413 5.0kb downstream 5.0kb downstream 6572 true scaffold_7: 9139437-9146008 Capsella rubella
Carub.0007s2413 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9139437-9144436 Capsella rubella
Carub.0007s2413 10.0kb upstream 10.0kb upstream 11572 true scaffold_7: 9144437-9156008 Capsella rubella
Carub.0007s2413 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9146009-9156008 Capsella rubella
Carub.0007s2413 10.0kb downstream 10.0kb downstream 11572 true scaffold_7: 9134437-9146008 Capsella rubella
Carub.0007s2413 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9134437-9144436 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380281 5261 Brassicaceae View MSA
123834652 5264 Brassicales-Malvales View MSA
124340660 5266 SBM View MSA
124253081 5268 Malvidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain