Gene : Carub.0007s2375 C. rubella v1.1
Defline:  (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) Genomic Order:  2375
Name:  ? Carub.0007s2375 Secondary Identifier:  ? PAC:39233100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2375 0.5kb upstream 0.5kb upstream 3971 true scaffold_7: 9001350-9005320 Capsella rubella
Carub.0007s2375 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9004821-9005320 Capsella rubella
Carub.0007s2375 0.5kb downstream 0.5kb downstream 3971 true scaffold_7: 9000850-9004820 Capsella rubella
Carub.0007s2375 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9000850-9001349 Capsella rubella
Carub.0007s2375 1.0kb upstream 1.0kb upstream 4471 true scaffold_7: 9001350-9005820 Capsella rubella
Carub.0007s2375 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9004821-9005820 Capsella rubella
Carub.0007s2375 1.0kb downstream 1.0kb downstream 4471 true scaffold_7: 9000350-9004820 Capsella rubella
Carub.0007s2375 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9000350-9001349 Capsella rubella
Carub.0007s2375 2.0kb upstream 2.0kb upstream 5471 true scaffold_7: 9001350-9006820 Capsella rubella
Carub.0007s2375 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9004821-9006820 Capsella rubella
Carub.0007s2375 2.0kb downstream 2.0kb downstream 5471 true scaffold_7: 8999350-9004820 Capsella rubella
Carub.0007s2375 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8999350-9001349 Capsella rubella
Carub.0007s2375 5.0kb upstream 5.0kb upstream 8471 true scaffold_7: 9001350-9009820 Capsella rubella
Carub.0007s2375 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9004821-9009820 Capsella rubella
Carub.0007s2375 5.0kb downstream 5.0kb downstream 8471 true scaffold_7: 8996350-9004820 Capsella rubella
Carub.0007s2375 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8996350-9001349 Capsella rubella
Carub.0007s2375 10.0kb upstream 10.0kb upstream 13471 true scaffold_7: 9001350-9014820 Capsella rubella
Carub.0007s2375 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9004821-9014820 Capsella rubella
Carub.0007s2375 10.0kb downstream 10.0kb downstream 13471 true scaffold_7: 8991350-9004820 Capsella rubella
Carub.0007s2375 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8991350-9001349 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378980 5261 Brassicaceae View MSA
123840224 5264 Brassicales-Malvales View MSA
124347008 5266 SBM View MSA
124245475 5268 Malvidae View MSA
124073071 5270 Rosid View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain