Gene : Carub.0007s2523 C. rubella v1.1

Defline:  (1 of 2) PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED Genomic Order:  2523
Name:  ? Carub.0007s2523 Secondary Identifier:  ? PAC:39231914

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2523 0.5kb upstream 0.5kb upstream 8222 true scaffold_7: 9583997-9592218 Capsella rubella
Carub.0007s2523 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9583997-9584496 Capsella rubella
Carub.0007s2523 0.5kb downstream 0.5kb downstream 8222 true scaffold_7: 9584497-9592718 Capsella rubella
Carub.0007s2523 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9592219-9592718 Capsella rubella
Carub.0007s2523 1.0kb upstream 1.0kb upstream 8722 true scaffold_7: 9583497-9592218 Capsella rubella
Carub.0007s2523 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9583497-9584496 Capsella rubella
Carub.0007s2523 1.0kb downstream 1.0kb downstream 8722 true scaffold_7: 9584497-9593218 Capsella rubella
Carub.0007s2523 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9592219-9593218 Capsella rubella
Carub.0007s2523 2.0kb upstream 2.0kb upstream 9722 true scaffold_7: 9582497-9592218 Capsella rubella
Carub.0007s2523 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9582497-9584496 Capsella rubella
Carub.0007s2523 2.0kb downstream 2.0kb downstream 9722 true scaffold_7: 9584497-9594218 Capsella rubella
Carub.0007s2523 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9592219-9594218 Capsella rubella
Carub.0007s2523 5.0kb upstream 5.0kb upstream 12722 true scaffold_7: 9579497-9592218 Capsella rubella
Carub.0007s2523 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9579497-9584496 Capsella rubella
Carub.0007s2523 5.0kb downstream 5.0kb downstream 12722 true scaffold_7: 9584497-9597218 Capsella rubella
Carub.0007s2523 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9592219-9597218 Capsella rubella
Carub.0007s2523 10.0kb upstream 10.0kb upstream 17722 true scaffold_7: 9574497-9592218 Capsella rubella
Carub.0007s2523 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9574497-9584496 Capsella rubella
Carub.0007s2523 10.0kb downstream 10.0kb downstream 17722 true scaffold_7: 9584497-9602218 Capsella rubella
Carub.0007s2523 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9592219-9602218 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378314 5261 Brassicaceae View MSA
123836757 5264 Brassicales-Malvales View MSA
124346764 5266 SBM View MSA
124246837 5268 Malvidae View MSA
124069363 5270 Rosid View MSA
123745901 5271 Pentapetalae View MSA
122794075 5272 Eudicot View MSA
122048371 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349798 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain