Gene : Carub.0006s1298 C. rubella v1.1
Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  1298
Name:  ? Carub.0006s1298 Secondary Identifier:  ? PAC:39246294
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARG-PRO-PWY Capsella rubella pathologic  
Crubella PROSYN-PWY Capsella rubella pathologic  
Crubella PWY-3341 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1298 0.5kb upstream 0.5kb upstream 2195 true scaffold_6: 4830866-4833060 Capsella rubella
Carub.0006s1298 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4832561-4833060 Capsella rubella
Carub.0006s1298 0.5kb downstream 0.5kb downstream 2195 true scaffold_6: 4830366-4832560 Capsella rubella
Carub.0006s1298 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4830366-4830865 Capsella rubella
Carub.0006s1298 1.0kb upstream 1.0kb upstream 2695 true scaffold_6: 4830866-4833560 Capsella rubella
Carub.0006s1298 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4832561-4833560 Capsella rubella
Carub.0006s1298 1.0kb downstream 1.0kb downstream 2695 true scaffold_6: 4829866-4832560 Capsella rubella
Carub.0006s1298 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4829866-4830865 Capsella rubella
Carub.0006s1298 2.0kb upstream 2.0kb upstream 3695 true scaffold_6: 4830866-4834560 Capsella rubella
Carub.0006s1298 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4832561-4834560 Capsella rubella
Carub.0006s1298 2.0kb downstream 2.0kb downstream 3695 true scaffold_6: 4828866-4832560 Capsella rubella
Carub.0006s1298 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4828866-4830865 Capsella rubella
Carub.0006s1298 5.0kb upstream 5.0kb upstream 6695 true scaffold_6: 4830866-4837560 Capsella rubella
Carub.0006s1298 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4832561-4837560 Capsella rubella
Carub.0006s1298 5.0kb downstream 5.0kb downstream 6695 true scaffold_6: 4825866-4832560 Capsella rubella
Carub.0006s1298 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4825866-4830865 Capsella rubella
Carub.0006s1298 10.0kb upstream 10.0kb upstream 11695 true scaffold_6: 4830866-4842560 Capsella rubella
Carub.0006s1298 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4832561-4842560 Capsella rubella
Carub.0006s1298 10.0kb downstream 10.0kb downstream 11695 true scaffold_6: 4820866-4832560 Capsella rubella
Carub.0006s1298 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4820866-4830865 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361924 5261 Brassicaceae View MSA
123837658 5264 Brassicales-Malvales View MSA
124337864 5266 SBM View MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain