Gene : Carub.0007s2353 C. rubella v1.1
Defline:  (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  2353
Name:  ? Carub.0007s2353 Secondary Identifier:  ? PAC:39234098
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGSYN-PWY Capsella rubella pathologic  
Crubella GLUTORN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2353 0.5kb upstream 0.5kb upstream 3172 true scaffold_7: 8905176-8908347 Capsella rubella
Carub.0007s2353 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8907848-8908347 Capsella rubella
Carub.0007s2353 0.5kb downstream 0.5kb downstream 3172 true scaffold_7: 8904676-8907847 Capsella rubella
Carub.0007s2353 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8904676-8905175 Capsella rubella
Carub.0007s2353 1.0kb upstream 1.0kb upstream 3672 true scaffold_7: 8905176-8908847 Capsella rubella
Carub.0007s2353 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8907848-8908847 Capsella rubella
Carub.0007s2353 1.0kb downstream 1.0kb downstream 3672 true scaffold_7: 8904176-8907847 Capsella rubella
Carub.0007s2353 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8904176-8905175 Capsella rubella
Carub.0007s2353 2.0kb upstream 2.0kb upstream 4672 true scaffold_7: 8905176-8909847 Capsella rubella
Carub.0007s2353 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8907848-8909847 Capsella rubella
Carub.0007s2353 2.0kb downstream 2.0kb downstream 4672 true scaffold_7: 8903176-8907847 Capsella rubella
Carub.0007s2353 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8903176-8905175 Capsella rubella
Carub.0007s2353 5.0kb upstream 5.0kb upstream 7672 true scaffold_7: 8905176-8912847 Capsella rubella
Carub.0007s2353 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8907848-8912847 Capsella rubella
Carub.0007s2353 5.0kb downstream 5.0kb downstream 7672 true scaffold_7: 8900176-8907847 Capsella rubella
Carub.0007s2353 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8900176-8905175 Capsella rubella
Carub.0007s2353 10.0kb upstream 10.0kb upstream 12672 true scaffold_7: 8905176-8917847 Capsella rubella
Carub.0007s2353 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8907848-8917847 Capsella rubella
Carub.0007s2353 10.0kb downstream 10.0kb downstream 12672 true scaffold_7: 8895176-8907847 Capsella rubella
Carub.0007s2353 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8895176-8905175 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375657 5261 Brassicaceae View MSA
123831336 5264 Brassicales-Malvales View MSA
124343627 5266 SBM View MSA
124240366 5268 Malvidae View MSA
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain