Gene : Carub.0007s2197 C. rubella v1.1
Defline:  (1 of 1) PTHR11782:SF3 - APYRASE 7-RELATED Genomic Order:  2197
Name:  ? Carub.0007s2197 Secondary Identifier:  ? PAC:39234122
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6545 Capsella rubella pathologic  
Crubella PWY-7177 Capsella rubella pathologic  
Crubella PWY-7184 Capsella rubella pathologic  
Crubella PWY-7185 Capsella rubella pathologic  
Crubella PWY-7210 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2197 0.5kb upstream 0.5kb upstream 3943 true scaffold_7: 8317598-8321540 Capsella rubella
Carub.0007s2197 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8317598-8318097 Capsella rubella
Carub.0007s2197 0.5kb downstream 0.5kb downstream 3943 true scaffold_7: 8318098-8322040 Capsella rubella
Carub.0007s2197 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8321541-8322040 Capsella rubella
Carub.0007s2197 1.0kb upstream 1.0kb upstream 4443 true scaffold_7: 8317098-8321540 Capsella rubella
Carub.0007s2197 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8317098-8318097 Capsella rubella
Carub.0007s2197 1.0kb downstream 1.0kb downstream 4443 true scaffold_7: 8318098-8322540 Capsella rubella
Carub.0007s2197 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8321541-8322540 Capsella rubella
Carub.0007s2197 2.0kb upstream 2.0kb upstream 5443 true scaffold_7: 8316098-8321540 Capsella rubella
Carub.0007s2197 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8316098-8318097 Capsella rubella
Carub.0007s2197 2.0kb downstream 2.0kb downstream 5443 true scaffold_7: 8318098-8323540 Capsella rubella
Carub.0007s2197 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8321541-8323540 Capsella rubella
Carub.0007s2197 5.0kb upstream 5.0kb upstream 8443 true scaffold_7: 8313098-8321540 Capsella rubella
Carub.0007s2197 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8313098-8318097 Capsella rubella
Carub.0007s2197 5.0kb downstream 5.0kb downstream 8443 true scaffold_7: 8318098-8326540 Capsella rubella
Carub.0007s2197 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8321541-8326540 Capsella rubella
Carub.0007s2197 10.0kb upstream 10.0kb upstream 13443 true scaffold_7: 8308098-8321540 Capsella rubella
Carub.0007s2197 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8308098-8318097 Capsella rubella
Carub.0007s2197 10.0kb downstream 10.0kb downstream 13443 true scaffold_7: 8318098-8331540 Capsella rubella
Carub.0007s2197 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8321541-8331540 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374026 5261 Brassicaceae View MSA
123827652 5264 Brassicales-Malvales View MSA
124339868 5266 SBM View MSA
124238552 5268 Malvidae View MSA
124066338 5270 Rosid View MSA
123737585 5271 Pentapetalae View MSA
122786265 5272 Eudicot View MSA
122042120 5273 Angiosperm View MSA
121349143 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain