Gene : Carub.0007s2249 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2249
Name:  ? Carub.0007s2249 Secondary Identifier:  ? PAC:39234225
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2249 0.5kb upstream 0.5kb upstream 3427 true scaffold_7: 8504049-8507475 Capsella rubella
Carub.0007s2249 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8506976-8507475 Capsella rubella
Carub.0007s2249 0.5kb downstream 0.5kb downstream 3427 true scaffold_7: 8503549-8506975 Capsella rubella
Carub.0007s2249 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8503549-8504048 Capsella rubella
Carub.0007s2249 1.0kb upstream 1.0kb upstream 3927 true scaffold_7: 8504049-8507975 Capsella rubella
Carub.0007s2249 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8506976-8507975 Capsella rubella
Carub.0007s2249 1.0kb downstream 1.0kb downstream 3927 true scaffold_7: 8503049-8506975 Capsella rubella
Carub.0007s2249 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8503049-8504048 Capsella rubella
Carub.0007s2249 2.0kb upstream 2.0kb upstream 4927 true scaffold_7: 8504049-8508975 Capsella rubella
Carub.0007s2249 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8506976-8508975 Capsella rubella
Carub.0007s2249 2.0kb downstream 2.0kb downstream 4927 true scaffold_7: 8502049-8506975 Capsella rubella
Carub.0007s2249 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8502049-8504048 Capsella rubella
Carub.0007s2249 5.0kb upstream 5.0kb upstream 7927 true scaffold_7: 8504049-8511975 Capsella rubella
Carub.0007s2249 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8506976-8511975 Capsella rubella
Carub.0007s2249 5.0kb downstream 5.0kb downstream 7927 true scaffold_7: 8499049-8506975 Capsella rubella
Carub.0007s2249 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8499049-8504048 Capsella rubella
Carub.0007s2249 10.0kb upstream 10.0kb upstream 12927 true scaffold_7: 8504049-8516975 Capsella rubella
Carub.0007s2249 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8506976-8516975 Capsella rubella
Carub.0007s2249 10.0kb downstream 10.0kb downstream 12927 true scaffold_7: 8494049-8506975 Capsella rubella
Carub.0007s2249 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8494049-8504048 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367627 5261 Brassicaceae View MSA
123829331 5264 Brassicales-Malvales View MSA
124340788 5266 SBM View MSA
124242256 5268 Malvidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain