Gene : Carub.0007s2044 C. rubella v1.1
Defline:  (1 of 4) PTHR18952//PTHR18952:SF118 - CARBONIC ANHYDRASE // ALPHA CARBONIC ANHYDRASE 6 Genomic Order:  2044
Name:  ? Carub.0007s2044 Secondary Identifier:  ? PAC:39232195
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYANCAT-PWY Capsella rubella pathologic  
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  
Crubella PWYQT-4429 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2044 0.5kb upstream 0.5kb upstream 1775 true scaffold_7: 7688176-7689950 Capsella rubella
Carub.0007s2044 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7689451-7689950 Capsella rubella
Carub.0007s2044 0.5kb downstream 0.5kb downstream 1775 true scaffold_7: 7687676-7689450 Capsella rubella
Carub.0007s2044 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7687676-7688175 Capsella rubella
Carub.0007s2044 1.0kb upstream 1.0kb upstream 2275 true scaffold_7: 7688176-7690450 Capsella rubella
Carub.0007s2044 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7689451-7690450 Capsella rubella
Carub.0007s2044 1.0kb downstream 1.0kb downstream 2275 true scaffold_7: 7687176-7689450 Capsella rubella
Carub.0007s2044 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7687176-7688175 Capsella rubella
Carub.0007s2044 2.0kb upstream 2.0kb upstream 3275 true scaffold_7: 7688176-7691450 Capsella rubella
Carub.0007s2044 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7689451-7691450 Capsella rubella
Carub.0007s2044 2.0kb downstream 2.0kb downstream 3275 true scaffold_7: 7686176-7689450 Capsella rubella
Carub.0007s2044 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7686176-7688175 Capsella rubella
Carub.0007s2044 5.0kb upstream 5.0kb upstream 6275 true scaffold_7: 7688176-7694450 Capsella rubella
Carub.0007s2044 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7689451-7694450 Capsella rubella
Carub.0007s2044 5.0kb downstream 5.0kb downstream 6275 true scaffold_7: 7683176-7689450 Capsella rubella
Carub.0007s2044 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7683176-7688175 Capsella rubella
Carub.0007s2044 10.0kb upstream 10.0kb upstream 11275 true scaffold_7: 7688176-7699450 Capsella rubella
Carub.0007s2044 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7689451-7699450 Capsella rubella
Carub.0007s2044 10.0kb downstream 10.0kb downstream 11275 true scaffold_7: 7678176-7689450 Capsella rubella
Carub.0007s2044 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7678176-7688175 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337306 5261 Brassicaceae View MSA
123777965 5264 Brassicales-Malvales View MSA
124276318 5266 SBM View MSA
124252564 5268 Malvidae View MSA
124067085 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain