Gene : Carub.0007s2047 C. rubella v1.1
Defline:  (1 of 1) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2047
Name:  ? Carub.0007s2047 Secondary Identifier:  ? PAC:39234683
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2047 0.5kb upstream 0.5kb upstream 1498 true scaffold_7: 7695600-7697097 Capsella rubella
Carub.0007s2047 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7696598-7697097 Capsella rubella
Carub.0007s2047 0.5kb downstream 0.5kb downstream 1498 true scaffold_7: 7695100-7696597 Capsella rubella
Carub.0007s2047 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7695100-7695599 Capsella rubella
Carub.0007s2047 1.0kb upstream 1.0kb upstream 1998 true scaffold_7: 7695600-7697597 Capsella rubella
Carub.0007s2047 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7696598-7697597 Capsella rubella
Carub.0007s2047 1.0kb downstream 1.0kb downstream 1998 true scaffold_7: 7694600-7696597 Capsella rubella
Carub.0007s2047 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7694600-7695599 Capsella rubella
Carub.0007s2047 2.0kb upstream 2.0kb upstream 2998 true scaffold_7: 7695600-7698597 Capsella rubella
Carub.0007s2047 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7696598-7698597 Capsella rubella
Carub.0007s2047 2.0kb downstream 2.0kb downstream 2998 true scaffold_7: 7693600-7696597 Capsella rubella
Carub.0007s2047 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7693600-7695599 Capsella rubella
Carub.0007s2047 5.0kb upstream 5.0kb upstream 5998 true scaffold_7: 7695600-7701597 Capsella rubella
Carub.0007s2047 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7696598-7701597 Capsella rubella
Carub.0007s2047 5.0kb downstream 5.0kb downstream 5998 true scaffold_7: 7690600-7696597 Capsella rubella
Carub.0007s2047 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7690600-7695599 Capsella rubella
Carub.0007s2047 10.0kb upstream 10.0kb upstream 10998 true scaffold_7: 7695600-7706597 Capsella rubella
Carub.0007s2047 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7696598-7706597 Capsella rubella
Carub.0007s2047 10.0kb downstream 10.0kb downstream 10998 true scaffold_7: 7685600-7696597 Capsella rubella
Carub.0007s2047 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7685600-7695599 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122363928 5261 Brassicaceae View MSA
123839972 5264 Brassicales-Malvales View MSA
124343731 5266 SBM View MSA
124253277 5268 Malvidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain