Gene : Carub.0007s2048 C. rubella v1.1
Defline:  (1 of 1) 3.5.4.26 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase Genomic Order:  2048
Name:  ? Carub.0007s2048 Secondary Identifier:  ? PAC:39233678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella RIBOSYN2-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2048 0.5kb upstream 0.5kb upstream 2386 true scaffold_7: 7697856-7700241 Capsella rubella
Carub.0007s2048 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7699742-7700241 Capsella rubella
Carub.0007s2048 0.5kb downstream 0.5kb downstream 2386 true scaffold_7: 7697356-7699741 Capsella rubella
Carub.0007s2048 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7697356-7697855 Capsella rubella
Carub.0007s2048 1.0kb upstream 1.0kb upstream 2886 true scaffold_7: 7697856-7700741 Capsella rubella
Carub.0007s2048 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7699742-7700741 Capsella rubella
Carub.0007s2048 1.0kb downstream 1.0kb downstream 2886 true scaffold_7: 7696856-7699741 Capsella rubella
Carub.0007s2048 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7696856-7697855 Capsella rubella
Carub.0007s2048 2.0kb upstream 2.0kb upstream 3886 true scaffold_7: 7697856-7701741 Capsella rubella
Carub.0007s2048 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7699742-7701741 Capsella rubella
Carub.0007s2048 2.0kb downstream 2.0kb downstream 3886 true scaffold_7: 7695856-7699741 Capsella rubella
Carub.0007s2048 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7695856-7697855 Capsella rubella
Carub.0007s2048 5.0kb upstream 5.0kb upstream 6886 true scaffold_7: 7697856-7704741 Capsella rubella
Carub.0007s2048 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7699742-7704741 Capsella rubella
Carub.0007s2048 5.0kb downstream 5.0kb downstream 6886 true scaffold_7: 7692856-7699741 Capsella rubella
Carub.0007s2048 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7692856-7697855 Capsella rubella
Carub.0007s2048 10.0kb upstream 10.0kb upstream 11886 true scaffold_7: 7697856-7709741 Capsella rubella
Carub.0007s2048 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7699742-7709741 Capsella rubella
Carub.0007s2048 10.0kb downstream 10.0kb downstream 11886 true scaffold_7: 7687856-7699741 Capsella rubella
Carub.0007s2048 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7687856-7697855 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373001 5261 Brassicaceae View MSA
123832957 5264 Brassicales-Malvales View MSA
124343517 5266 SBM View MSA
124241930 5268 Malvidae View MSA
124065963 5270 Rosid View MSA
123740578 5271 Pentapetalae View MSA
122787419 5272 Eudicot View MSA
122047266 5273 Angiosperm View MSA
121347382 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain