Gene : Carub.0007s2037 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2037
Name:  ? Carub.0007s2037 Secondary Identifier:  ? PAC:39235735
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2037 0.5kb upstream 0.5kb upstream 2294 true scaffold_7: 7672691-7674984 Capsella rubella
Carub.0007s2037 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7674485-7674984 Capsella rubella
Carub.0007s2037 0.5kb downstream 0.5kb downstream 2294 true scaffold_7: 7672191-7674484 Capsella rubella
Carub.0007s2037 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7672191-7672690 Capsella rubella
Carub.0007s2037 1.0kb upstream 1.0kb upstream 2794 true scaffold_7: 7672691-7675484 Capsella rubella
Carub.0007s2037 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7674485-7675484 Capsella rubella
Carub.0007s2037 1.0kb downstream 1.0kb downstream 2794 true scaffold_7: 7671691-7674484 Capsella rubella
Carub.0007s2037 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7671691-7672690 Capsella rubella
Carub.0007s2037 2.0kb upstream 2.0kb upstream 3794 true scaffold_7: 7672691-7676484 Capsella rubella
Carub.0007s2037 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7674485-7676484 Capsella rubella
Carub.0007s2037 2.0kb downstream 2.0kb downstream 3794 true scaffold_7: 7670691-7674484 Capsella rubella
Carub.0007s2037 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7670691-7672690 Capsella rubella
Carub.0007s2037 5.0kb upstream 5.0kb upstream 6794 true scaffold_7: 7672691-7679484 Capsella rubella
Carub.0007s2037 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7674485-7679484 Capsella rubella
Carub.0007s2037 5.0kb downstream 5.0kb downstream 6794 true scaffold_7: 7667691-7674484 Capsella rubella
Carub.0007s2037 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7667691-7672690 Capsella rubella
Carub.0007s2037 10.0kb upstream 10.0kb upstream 11794 true scaffold_7: 7672691-7684484 Capsella rubella
Carub.0007s2037 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7674485-7684484 Capsella rubella
Carub.0007s2037 10.0kb downstream 10.0kb downstream 11794 true scaffold_7: 7662691-7674484 Capsella rubella
Carub.0007s2037 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7662691-7672690 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377914 5261 Brassicaceae View MSA
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain