Gene : Carub.0006s1330 C. rubella v1.1
Defline:  (1 of 4) PTHR31429:SF1 - WRKY FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  1330
Name:  ? Carub.0006s1330 Secondary Identifier:  ? PAC:39247746
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1330 0.5kb upstream 0.5kb upstream 3022 true scaffold_6: 4949029-4952050 Capsella rubella
Carub.0006s1330 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4949029-4949528 Capsella rubella
Carub.0006s1330 0.5kb downstream 0.5kb downstream 3022 true scaffold_6: 4949529-4952550 Capsella rubella
Carub.0006s1330 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4952051-4952550 Capsella rubella
Carub.0006s1330 1.0kb upstream 1.0kb upstream 3522 true scaffold_6: 4948529-4952050 Capsella rubella
Carub.0006s1330 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4948529-4949528 Capsella rubella
Carub.0006s1330 1.0kb downstream 1.0kb downstream 3522 true scaffold_6: 4949529-4953050 Capsella rubella
Carub.0006s1330 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4952051-4953050 Capsella rubella
Carub.0006s1330 2.0kb upstream 2.0kb upstream 4522 true scaffold_6: 4947529-4952050 Capsella rubella
Carub.0006s1330 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4947529-4949528 Capsella rubella
Carub.0006s1330 2.0kb downstream 2.0kb downstream 4522 true scaffold_6: 4949529-4954050 Capsella rubella
Carub.0006s1330 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4952051-4954050 Capsella rubella
Carub.0006s1330 5.0kb upstream 5.0kb upstream 7522 true scaffold_6: 4944529-4952050 Capsella rubella
Carub.0006s1330 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4944529-4949528 Capsella rubella
Carub.0006s1330 5.0kb downstream 5.0kb downstream 7522 true scaffold_6: 4949529-4957050 Capsella rubella
Carub.0006s1330 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4952051-4957050 Capsella rubella
Carub.0006s1330 10.0kb upstream 10.0kb upstream 12522 true scaffold_6: 4939529-4952050 Capsella rubella
Carub.0006s1330 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4939529-4949528 Capsella rubella
Carub.0006s1330 10.0kb downstream 10.0kb downstream 12522 true scaffold_6: 4949529-4962050 Capsella rubella
Carub.0006s1330 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4952051-4962050 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363822 5261 Brassicaceae View MSA
123829927 5264 Brassicales-Malvales View MSA
124339941 5266 SBM View MSA
124245462 5268 Malvidae View MSA
124070003 5270 Rosid View MSA
123745248 5271 Pentapetalae View MSA
122796714 5272 Eudicot View MSA
122044193 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain