Gene : Carub.0007s2177 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2177
Name:  ? Carub.0007s2177 Secondary Identifier:  ? PAC:39233126
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2177 0.5kb upstream 0.5kb upstream 4371 true scaffold_7: 8228454-8232824 Capsella rubella
Carub.0007s2177 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 8228454-8228953 Capsella rubella
Carub.0007s2177 0.5kb downstream 0.5kb downstream 4371 true scaffold_7: 8228954-8233324 Capsella rubella
Carub.0007s2177 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 8232825-8233324 Capsella rubella
Carub.0007s2177 1.0kb upstream 1.0kb upstream 4871 true scaffold_7: 8227954-8232824 Capsella rubella
Carub.0007s2177 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 8227954-8228953 Capsella rubella
Carub.0007s2177 1.0kb downstream 1.0kb downstream 4871 true scaffold_7: 8228954-8233824 Capsella rubella
Carub.0007s2177 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 8232825-8233824 Capsella rubella
Carub.0007s2177 2.0kb upstream 2.0kb upstream 5871 true scaffold_7: 8226954-8232824 Capsella rubella
Carub.0007s2177 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 8226954-8228953 Capsella rubella
Carub.0007s2177 2.0kb downstream 2.0kb downstream 5871 true scaffold_7: 8228954-8234824 Capsella rubella
Carub.0007s2177 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8232825-8234824 Capsella rubella
Carub.0007s2177 5.0kb upstream 5.0kb upstream 8871 true scaffold_7: 8223954-8232824 Capsella rubella
Carub.0007s2177 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 8223954-8228953 Capsella rubella
Carub.0007s2177 5.0kb downstream 5.0kb downstream 8871 true scaffold_7: 8228954-8237824 Capsella rubella
Carub.0007s2177 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 8232825-8237824 Capsella rubella
Carub.0007s2177 10.0kb upstream 10.0kb upstream 13871 true scaffold_7: 8218954-8232824 Capsella rubella
Carub.0007s2177 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 8218954-8228953 Capsella rubella
Carub.0007s2177 10.0kb downstream 10.0kb downstream 13871 true scaffold_7: 8228954-8242824 Capsella rubella
Carub.0007s2177 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 8232825-8242824 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377715 5261 Brassicaceae View MSA
123834353 5264 Brassicales-Malvales View MSA
124339820 5266 SBM View MSA
124251579 5268 Malvidae View MSA
124072588 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain