Gene : Carub.0007s1901 C. rubella v1.1
Defline:  (1 of 2) PTHR10655//PTHR10655:SF20 - LYSOPHOSPHOLIPASE-RELATED // CARBOXYLESTERASE Genomic Order:  1901
Name:  ? Carub.0007s1901 Secondary Identifier:  ? PAC:39233890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1901 0.5kb upstream 0.5kb upstream 2295 true scaffold_7: 7133983-7136277 Capsella rubella
Carub.0007s1901 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7133983-7134482 Capsella rubella
Carub.0007s1901 0.5kb downstream 0.5kb downstream 2295 true scaffold_7: 7134483-7136777 Capsella rubella
Carub.0007s1901 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7136278-7136777 Capsella rubella
Carub.0007s1901 1.0kb upstream 1.0kb upstream 2795 true scaffold_7: 7133483-7136277 Capsella rubella
Carub.0007s1901 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7133483-7134482 Capsella rubella
Carub.0007s1901 1.0kb downstream 1.0kb downstream 2795 true scaffold_7: 7134483-7137277 Capsella rubella
Carub.0007s1901 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7136278-7137277 Capsella rubella
Carub.0007s1901 2.0kb upstream 2.0kb upstream 3795 true scaffold_7: 7132483-7136277 Capsella rubella
Carub.0007s1901 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7132483-7134482 Capsella rubella
Carub.0007s1901 2.0kb downstream 2.0kb downstream 3795 true scaffold_7: 7134483-7138277 Capsella rubella
Carub.0007s1901 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7136278-7138277 Capsella rubella
Carub.0007s1901 5.0kb upstream 5.0kb upstream 6795 true scaffold_7: 7129483-7136277 Capsella rubella
Carub.0007s1901 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7129483-7134482 Capsella rubella
Carub.0007s1901 5.0kb downstream 5.0kb downstream 6795 true scaffold_7: 7134483-7141277 Capsella rubella
Carub.0007s1901 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7136278-7141277 Capsella rubella
Carub.0007s1901 10.0kb upstream 10.0kb upstream 11795 true scaffold_7: 7124483-7136277 Capsella rubella
Carub.0007s1901 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7124483-7134482 Capsella rubella
Carub.0007s1901 10.0kb downstream 10.0kb downstream 11795 true scaffold_7: 7134483-7146277 Capsella rubella
Carub.0007s1901 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7136278-7146277 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376383 5261 Brassicaceae View MSA
123831256 5264 Brassicales-Malvales View MSA
124346497 5266 SBM View MSA
124241840 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain