Gene : Carub.0007s1920 C. rubella v1.1
Defline:  (1 of 5) PTHR13018//PTHR13018:SF47 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  1920
Name:  ? Carub.0007s1920 Secondary Identifier:  ? PAC:39232931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1920 0.5kb upstream 0.5kb upstream 4700 true scaffold_7: 7194630-7199329 Capsella rubella
Carub.0007s1920 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7194630-7195129 Capsella rubella
Carub.0007s1920 0.5kb downstream 0.5kb downstream 4700 true scaffold_7: 7195130-7199829 Capsella rubella
Carub.0007s1920 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7199330-7199829 Capsella rubella
Carub.0007s1920 1.0kb upstream 1.0kb upstream 5200 true scaffold_7: 7194130-7199329 Capsella rubella
Carub.0007s1920 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7194130-7195129 Capsella rubella
Carub.0007s1920 1.0kb downstream 1.0kb downstream 5200 true scaffold_7: 7195130-7200329 Capsella rubella
Carub.0007s1920 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7199330-7200329 Capsella rubella
Carub.0007s1920 2.0kb upstream 2.0kb upstream 6200 true scaffold_7: 7193130-7199329 Capsella rubella
Carub.0007s1920 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7193130-7195129 Capsella rubella
Carub.0007s1920 2.0kb downstream 2.0kb downstream 6200 true scaffold_7: 7195130-7201329 Capsella rubella
Carub.0007s1920 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7199330-7201329 Capsella rubella
Carub.0007s1920 5.0kb upstream 5.0kb upstream 9200 true scaffold_7: 7190130-7199329 Capsella rubella
Carub.0007s1920 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7190130-7195129 Capsella rubella
Carub.0007s1920 5.0kb downstream 5.0kb downstream 9200 true scaffold_7: 7195130-7204329 Capsella rubella
Carub.0007s1920 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7199330-7204329 Capsella rubella
Carub.0007s1920 10.0kb upstream 10.0kb upstream 14200 true scaffold_7: 7185130-7199329 Capsella rubella
Carub.0007s1920 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7185130-7195129 Capsella rubella
Carub.0007s1920 10.0kb downstream 10.0kb downstream 14200 true scaffold_7: 7195130-7209329 Capsella rubella
Carub.0007s1920 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7199330-7209329 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369373 5261 Brassicaceae View MSA
123829163 5264 Brassicales-Malvales View MSA
124321579 5266 SBM View MSA
124253508 5268 Malvidae View MSA
124067604 5270 Rosid View MSA
123747702 5271 Pentapetalae View MSA
122790642 5272 Eudicot View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain