Gene : Carub.0007s1940 C. rubella v1.1
Defline:  (1 of 8) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  1940
Name:  ? Carub.0007s1940 Secondary Identifier:  ? PAC:39235739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1940 0.5kb upstream 0.5kb upstream 3025 true scaffold_7: 7270484-7273508 Capsella rubella
Carub.0007s1940 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7273009-7273508 Capsella rubella
Carub.0007s1940 0.5kb downstream 0.5kb downstream 3025 true scaffold_7: 7269984-7273008 Capsella rubella
Carub.0007s1940 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7269984-7270483 Capsella rubella
Carub.0007s1940 1.0kb upstream 1.0kb upstream 3525 true scaffold_7: 7270484-7274008 Capsella rubella
Carub.0007s1940 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7273009-7274008 Capsella rubella
Carub.0007s1940 1.0kb downstream 1.0kb downstream 3525 true scaffold_7: 7269484-7273008 Capsella rubella
Carub.0007s1940 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7269484-7270483 Capsella rubella
Carub.0007s1940 2.0kb upstream 2.0kb upstream 4525 true scaffold_7: 7270484-7275008 Capsella rubella
Carub.0007s1940 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7273009-7275008 Capsella rubella
Carub.0007s1940 2.0kb downstream 2.0kb downstream 4525 true scaffold_7: 7268484-7273008 Capsella rubella
Carub.0007s1940 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7268484-7270483 Capsella rubella
Carub.0007s1940 5.0kb upstream 5.0kb upstream 7525 true scaffold_7: 7270484-7278008 Capsella rubella
Carub.0007s1940 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7273009-7278008 Capsella rubella
Carub.0007s1940 5.0kb downstream 5.0kb downstream 7525 true scaffold_7: 7265484-7273008 Capsella rubella
Carub.0007s1940 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7265484-7270483 Capsella rubella
Carub.0007s1940 10.0kb upstream 10.0kb upstream 12525 true scaffold_7: 7270484-7283008 Capsella rubella
Carub.0007s1940 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7273009-7283008 Capsella rubella
Carub.0007s1940 10.0kb downstream 10.0kb downstream 12525 true scaffold_7: 7260484-7273008 Capsella rubella
Carub.0007s1940 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7260484-7270483 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374305 5261 Brassicaceae View MSA
123800726 5264 Brassicales-Malvales View MSA
124298100 5266 SBM View MSA
124149829 5268 Malvidae View MSA
123875559 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain