Gene : Carub.0007s1949 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1949
Name:  ? Carub.0007s1949 Secondary Identifier:  ? PAC:39235621
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1949 0.5kb upstream 0.5kb upstream 5837 true scaffold_7: 7299721-7305557 Capsella rubella
Carub.0007s1949 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7305058-7305557 Capsella rubella
Carub.0007s1949 0.5kb downstream 0.5kb downstream 5837 true scaffold_7: 7299221-7305057 Capsella rubella
Carub.0007s1949 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7299221-7299720 Capsella rubella
Carub.0007s1949 1.0kb upstream 1.0kb upstream 6337 true scaffold_7: 7299721-7306057 Capsella rubella
Carub.0007s1949 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7305058-7306057 Capsella rubella
Carub.0007s1949 1.0kb downstream 1.0kb downstream 6337 true scaffold_7: 7298721-7305057 Capsella rubella
Carub.0007s1949 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7298721-7299720 Capsella rubella
Carub.0007s1949 2.0kb upstream 2.0kb upstream 7337 true scaffold_7: 7299721-7307057 Capsella rubella
Carub.0007s1949 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7305058-7307057 Capsella rubella
Carub.0007s1949 2.0kb downstream 2.0kb downstream 7337 true scaffold_7: 7297721-7305057 Capsella rubella
Carub.0007s1949 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7297721-7299720 Capsella rubella
Carub.0007s1949 5.0kb upstream 5.0kb upstream 10337 true scaffold_7: 7299721-7310057 Capsella rubella
Carub.0007s1949 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7305058-7310057 Capsella rubella
Carub.0007s1949 5.0kb downstream 5.0kb downstream 10337 true scaffold_7: 7294721-7305057 Capsella rubella
Carub.0007s1949 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7294721-7299720 Capsella rubella
Carub.0007s1949 10.0kb upstream 10.0kb upstream 15337 true scaffold_7: 7299721-7315057 Capsella rubella
Carub.0007s1949 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7305058-7315057 Capsella rubella
Carub.0007s1949 10.0kb downstream 10.0kb downstream 15337 true scaffold_7: 7289721-7305057 Capsella rubella
Carub.0007s1949 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7289721-7299720 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363254 5261 Brassicaceae View MSA
123836136 5264 Brassicales-Malvales View MSA
124322135 5266 SBM View MSA
124239590 5268 Malvidae View MSA
124071393 5270 Rosid View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain