Gene : Carub.0006s3357 C. rubella v1.1
Defline:  (1 of 13) PTHR24177//PTHR24177:SF52 - FAMILY NOT NAMED // ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  3357
Name:  ? Carub.0006s3357 Secondary Identifier:  ? PAC:39247867
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3357 0.5kb upstream 0.5kb upstream 2704 true scaffold_6: 15166656-15169359 Capsella rubella
Carub.0006s3357 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15166656-15167155 Capsella rubella
Carub.0006s3357 0.5kb downstream 0.5kb downstream 2704 true scaffold_6: 15167156-15169859 Capsella rubella
Carub.0006s3357 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15169360-15169859 Capsella rubella
Carub.0006s3357 1.0kb upstream 1.0kb upstream 3204 true scaffold_6: 15166156-15169359 Capsella rubella
Carub.0006s3357 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15166156-15167155 Capsella rubella
Carub.0006s3357 1.0kb downstream 1.0kb downstream 3204 true scaffold_6: 15167156-15170359 Capsella rubella
Carub.0006s3357 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15169360-15170359 Capsella rubella
Carub.0006s3357 2.0kb upstream 2.0kb upstream 4204 true scaffold_6: 15165156-15169359 Capsella rubella
Carub.0006s3357 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15165156-15167155 Capsella rubella
Carub.0006s3357 2.0kb downstream 2.0kb downstream 4204 true scaffold_6: 15167156-15171359 Capsella rubella
Carub.0006s3357 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15169360-15171359 Capsella rubella
Carub.0006s3357 5.0kb upstream 5.0kb upstream 7204 true scaffold_6: 15162156-15169359 Capsella rubella
Carub.0006s3357 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15162156-15167155 Capsella rubella
Carub.0006s3357 5.0kb downstream 5.0kb downstream 7204 true scaffold_6: 15167156-15174359 Capsella rubella
Carub.0006s3357 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15169360-15174359 Capsella rubella
Carub.0006s3357 10.0kb upstream 10.0kb upstream 12204 true scaffold_6: 15157156-15169359 Capsella rubella
Carub.0006s3357 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15157156-15167155 Capsella rubella
Carub.0006s3357 10.0kb downstream 10.0kb downstream 12204 true scaffold_6: 15167156-15179359 Capsella rubella
Carub.0006s3357 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15169360-15179359 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380543 5261 Brassicaceae View MSA
123802777 5264 Brassicales-Malvales View MSA
124351539 5266 SBM View MSA
124254584 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain