Gene : Carub.0006s3587 C. rubella v1.1
Defline:  (1 of 3) PTHR23107 - SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN Genomic Order:  3587
Name:  ? Carub.0006s3587 Secondary Identifier:  ? PAC:39249997
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3587 0.5kb upstream 0.5kb upstream 1978 true scaffold_6: 16110397-16112374 Capsella rubella
Carub.0006s3587 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16110397-16110896 Capsella rubella
Carub.0006s3587 0.5kb downstream 0.5kb downstream 1978 true scaffold_6: 16110897-16112874 Capsella rubella
Carub.0006s3587 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16112375-16112874 Capsella rubella
Carub.0006s3587 1.0kb upstream 1.0kb upstream 2478 true scaffold_6: 16109897-16112374 Capsella rubella
Carub.0006s3587 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16109897-16110896 Capsella rubella
Carub.0006s3587 1.0kb downstream 1.0kb downstream 2478 true scaffold_6: 16110897-16113374 Capsella rubella
Carub.0006s3587 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16112375-16113374 Capsella rubella
Carub.0006s3587 2.0kb upstream 2.0kb upstream 3478 true scaffold_6: 16108897-16112374 Capsella rubella
Carub.0006s3587 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16108897-16110896 Capsella rubella
Carub.0006s3587 2.0kb downstream 2.0kb downstream 3478 true scaffold_6: 16110897-16114374 Capsella rubella
Carub.0006s3587 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16112375-16114374 Capsella rubella
Carub.0006s3587 5.0kb upstream 5.0kb upstream 6478 true scaffold_6: 16105897-16112374 Capsella rubella
Carub.0006s3587 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16105897-16110896 Capsella rubella
Carub.0006s3587 5.0kb downstream 5.0kb downstream 6478 true scaffold_6: 16110897-16117374 Capsella rubella
Carub.0006s3587 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16112375-16117374 Capsella rubella
Carub.0006s3587 10.0kb upstream 10.0kb upstream 11478 true scaffold_6: 16100897-16112374 Capsella rubella
Carub.0006s3587 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16100897-16110896 Capsella rubella
Carub.0006s3587 10.0kb downstream 10.0kb downstream 11478 true scaffold_6: 16110897-16122374 Capsella rubella
Carub.0006s3587 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16112375-16122374 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377357 5261 Brassicaceae View MSA
123830684 5264 Brassicales-Malvales View MSA
124349935 5266 SBM View MSA
124241456 5268 Malvidae View MSA
124069002 5270 Rosid View MSA
123750864 5271 Pentapetalae View MSA
122788069 5272 Eudicot View MSA
122049266 5273 Angiosperm View MSA
121351391 5274 Embryophyte View MSA
123426567 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain