Gene : Carub.0006s3668 C. rubella v1.1
Defline:  (1 of 1) PTHR10491:SF7 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  3668
Name:  ? Carub.0006s3668 Secondary Identifier:  ? PAC:39246847
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ETHYL-PWY Capsella rubella pathologic  
Crubella PWY-5041 Capsella rubella pathologic  
Crubella PWY-7270 Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic  
Crubella SAM-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3668 0.5kb upstream 0.5kb upstream 2176 true scaffold_6: 16397535-16399710 Capsella rubella
Carub.0006s3668 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16397535-16398034 Capsella rubella
Carub.0006s3668 0.5kb downstream 0.5kb downstream 2176 true scaffold_6: 16398035-16400210 Capsella rubella
Carub.0006s3668 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16399711-16400210 Capsella rubella
Carub.0006s3668 1.0kb upstream 1.0kb upstream 2676 true scaffold_6: 16397035-16399710 Capsella rubella
Carub.0006s3668 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16397035-16398034 Capsella rubella
Carub.0006s3668 1.0kb downstream 1.0kb downstream 2676 true scaffold_6: 16398035-16400710 Capsella rubella
Carub.0006s3668 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16399711-16400710 Capsella rubella
Carub.0006s3668 2.0kb upstream 2.0kb upstream 3676 true scaffold_6: 16396035-16399710 Capsella rubella
Carub.0006s3668 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16396035-16398034 Capsella rubella
Carub.0006s3668 2.0kb downstream 2.0kb downstream 3676 true scaffold_6: 16398035-16401710 Capsella rubella
Carub.0006s3668 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16399711-16401710 Capsella rubella
Carub.0006s3668 5.0kb upstream 5.0kb upstream 6676 true scaffold_6: 16393035-16399710 Capsella rubella
Carub.0006s3668 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16393035-16398034 Capsella rubella
Carub.0006s3668 5.0kb downstream 5.0kb downstream 6676 true scaffold_6: 16398035-16404710 Capsella rubella
Carub.0006s3668 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16399711-16404710 Capsella rubella
Carub.0006s3668 10.0kb upstream 10.0kb upstream 11676 true scaffold_6: 16388035-16399710 Capsella rubella
Carub.0006s3668 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16388035-16398034 Capsella rubella
Carub.0006s3668 10.0kb downstream 10.0kb downstream 11676 true scaffold_6: 16398035-16409710 Capsella rubella
Carub.0006s3668 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16399711-16409710 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373265 5261 Brassicaceae View MSA
123833363 5264 Brassicales-Malvales View MSA
124345444 5266 SBM View MSA
124242488 5268 Malvidae View MSA
124068376 5270 Rosid View MSA
123738972 5271 Pentapetalae View MSA
122787583 5272 Eudicot View MSA
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain