Gene : Carub.0006s3682 C. rubella v1.1
Defline:  (1 of 4) PTHR21726//PTHR21726:SF30 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  3682
Name:  ? Carub.0006s3682 Secondary Identifier:  ? PAC:39249990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3682 0.5kb upstream 0.5kb upstream 5461 true scaffold_6: 16446790-16452250 Capsella rubella
Carub.0006s3682 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16451751-16452250 Capsella rubella
Carub.0006s3682 0.5kb downstream 0.5kb downstream 5461 true scaffold_6: 16446290-16451750 Capsella rubella
Carub.0006s3682 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16446290-16446789 Capsella rubella
Carub.0006s3682 1.0kb upstream 1.0kb upstream 5961 true scaffold_6: 16446790-16452750 Capsella rubella
Carub.0006s3682 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16451751-16452750 Capsella rubella
Carub.0006s3682 1.0kb downstream 1.0kb downstream 5961 true scaffold_6: 16445790-16451750 Capsella rubella
Carub.0006s3682 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16445790-16446789 Capsella rubella
Carub.0006s3682 2.0kb upstream 2.0kb upstream 6961 true scaffold_6: 16446790-16453750 Capsella rubella
Carub.0006s3682 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16451751-16453750 Capsella rubella
Carub.0006s3682 2.0kb downstream 2.0kb downstream 6961 true scaffold_6: 16444790-16451750 Capsella rubella
Carub.0006s3682 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16444790-16446789 Capsella rubella
Carub.0006s3682 5.0kb upstream 5.0kb upstream 9961 true scaffold_6: 16446790-16456750 Capsella rubella
Carub.0006s3682 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16451751-16456750 Capsella rubella
Carub.0006s3682 5.0kb downstream 5.0kb downstream 9961 true scaffold_6: 16441790-16451750 Capsella rubella
Carub.0006s3682 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16441790-16446789 Capsella rubella
Carub.0006s3682 10.0kb upstream 10.0kb upstream 14961 true scaffold_6: 16446790-16461750 Capsella rubella
Carub.0006s3682 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16451751-16461750 Capsella rubella
Carub.0006s3682 10.0kb downstream 10.0kb downstream 14961 true scaffold_6: 16436790-16451750 Capsella rubella
Carub.0006s3682 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16436790-16446789 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364614 5261 Brassicaceae View MSA
123838339 5264 Brassicales-Malvales View MSA
124344530 5266 SBM View MSA
124246439 5268 Malvidae View MSA
124068071 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain