Gene : Carub.0006s1591 C. rubella v1.1
Defline:  (1 of 1) PTHR15495//PTHR15495:SF17 - NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1591
Name:  ? Carub.0006s1591 Secondary Identifier:  ? PAC:39249440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY66-399 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1591 0.5kb upstream 0.5kb upstream 2194 true scaffold_6: 5872686-5874879 Capsella rubella
Carub.0006s1591 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5872686-5873185 Capsella rubella
Carub.0006s1591 0.5kb downstream 0.5kb downstream 2194 true scaffold_6: 5873186-5875379 Capsella rubella
Carub.0006s1591 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5874880-5875379 Capsella rubella
Carub.0006s1591 1.0kb upstream 1.0kb upstream 2694 true scaffold_6: 5872186-5874879 Capsella rubella
Carub.0006s1591 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5872186-5873185 Capsella rubella
Carub.0006s1591 1.0kb downstream 1.0kb downstream 2694 true scaffold_6: 5873186-5875879 Capsella rubella
Carub.0006s1591 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5874880-5875879 Capsella rubella
Carub.0006s1591 2.0kb upstream 2.0kb upstream 3694 true scaffold_6: 5871186-5874879 Capsella rubella
Carub.0006s1591 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5871186-5873185 Capsella rubella
Carub.0006s1591 2.0kb downstream 2.0kb downstream 3694 true scaffold_6: 5873186-5876879 Capsella rubella
Carub.0006s1591 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5874880-5876879 Capsella rubella
Carub.0006s1591 5.0kb upstream 5.0kb upstream 6694 true scaffold_6: 5868186-5874879 Capsella rubella
Carub.0006s1591 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5868186-5873185 Capsella rubella
Carub.0006s1591 5.0kb downstream 5.0kb downstream 6694 true scaffold_6: 5873186-5879879 Capsella rubella
Carub.0006s1591 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5874880-5879879 Capsella rubella
Carub.0006s1591 10.0kb upstream 10.0kb upstream 11694 true scaffold_6: 5863186-5874879 Capsella rubella
Carub.0006s1591 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5863186-5873185 Capsella rubella
Carub.0006s1591 10.0kb downstream 10.0kb downstream 11694 true scaffold_6: 5873186-5884879 Capsella rubella
Carub.0006s1591 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5874880-5884879 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367163 5261 Brassicaceae View MSA
123832535 5264 Brassicales-Malvales View MSA
124339707 5266 SBM View MSA
124240599 5268 Malvidae View MSA
124065569 5270 Rosid View MSA
123747210 5271 Pentapetalae View MSA
122789939 5272 Eudicot View MSA
122045656 5273 Angiosperm View MSA
121347339 5274 Embryophyte View MSA
123426841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain