Gene : Carub.0006s3688 C. rubella v1.1
Defline:  (1 of 2) PTHR34797:SF1 - EXPRESSED PROTEIN Genomic Order:  3688
Name:  ? Carub.0006s3688 Secondary Identifier:  ? PAC:39247777
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3688 0.5kb upstream 0.5kb upstream 2328 true scaffold_6: 16473208-16475535 Capsella rubella
Carub.0006s3688 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16475036-16475535 Capsella rubella
Carub.0006s3688 0.5kb downstream 0.5kb downstream 2328 true scaffold_6: 16472708-16475035 Capsella rubella
Carub.0006s3688 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16472708-16473207 Capsella rubella
Carub.0006s3688 1.0kb upstream 1.0kb upstream 2828 true scaffold_6: 16473208-16476035 Capsella rubella
Carub.0006s3688 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16475036-16476035 Capsella rubella
Carub.0006s3688 1.0kb downstream 1.0kb downstream 2828 true scaffold_6: 16472208-16475035 Capsella rubella
Carub.0006s3688 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16472208-16473207 Capsella rubella
Carub.0006s3688 2.0kb upstream 2.0kb upstream 3828 true scaffold_6: 16473208-16477035 Capsella rubella
Carub.0006s3688 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16475036-16477035 Capsella rubella
Carub.0006s3688 2.0kb downstream 2.0kb downstream 3828 true scaffold_6: 16471208-16475035 Capsella rubella
Carub.0006s3688 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16471208-16473207 Capsella rubella
Carub.0006s3688 5.0kb upstream 5.0kb upstream 6828 true scaffold_6: 16473208-16480035 Capsella rubella
Carub.0006s3688 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16475036-16480035 Capsella rubella
Carub.0006s3688 5.0kb downstream 5.0kb downstream 6828 true scaffold_6: 16468208-16475035 Capsella rubella
Carub.0006s3688 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16468208-16473207 Capsella rubella
Carub.0006s3688 10.0kb upstream 10.0kb upstream 11828 true scaffold_6: 16473208-16485035 Capsella rubella
Carub.0006s3688 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16475036-16485035 Capsella rubella
Carub.0006s3688 10.0kb downstream 10.0kb downstream 11828 true scaffold_6: 16463208-16475035 Capsella rubella
Carub.0006s3688 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16463208-16473207 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041192 5273 Angiosperm View MSA
122370123 5261 Brassicaceae View MSA
123837297 5264 Brassicales-Malvales View MSA
124341426 5266 SBM View MSA
124251662 5268 Malvidae View MSA
124069169 5270 Rosid View MSA
123746892 5271 Pentapetalae View MSA
122786328 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain