Gene : Carub.0006s1624 C. rubella v1.1
Defline:  (1 of 182) PTHR31790//PTHR31790:SF10 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  1624
Name:  ? Carub.0006s1624 Secondary Identifier:  ? PAC:39246096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1624 0.5kb upstream 0.5kb upstream 1646 true scaffold_6: 6003945-6005590 Capsella rubella
Carub.0006s1624 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6005091-6005590 Capsella rubella
Carub.0006s1624 0.5kb downstream 0.5kb downstream 1646 true scaffold_6: 6003445-6005090 Capsella rubella
Carub.0006s1624 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6003445-6003944 Capsella rubella
Carub.0006s1624 1.0kb upstream 1.0kb upstream 2146 true scaffold_6: 6003945-6006090 Capsella rubella
Carub.0006s1624 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6005091-6006090 Capsella rubella
Carub.0006s1624 1.0kb downstream 1.0kb downstream 2146 true scaffold_6: 6002945-6005090 Capsella rubella
Carub.0006s1624 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6002945-6003944 Capsella rubella
Carub.0006s1624 2.0kb upstream 2.0kb upstream 3146 true scaffold_6: 6003945-6007090 Capsella rubella
Carub.0006s1624 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6005091-6007090 Capsella rubella
Carub.0006s1624 2.0kb downstream 2.0kb downstream 3146 true scaffold_6: 6001945-6005090 Capsella rubella
Carub.0006s1624 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6001945-6003944 Capsella rubella
Carub.0006s1624 5.0kb upstream 5.0kb upstream 6146 true scaffold_6: 6003945-6010090 Capsella rubella
Carub.0006s1624 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6005091-6010090 Capsella rubella
Carub.0006s1624 5.0kb downstream 5.0kb downstream 6146 true scaffold_6: 5998945-6005090 Capsella rubella
Carub.0006s1624 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5998945-6003944 Capsella rubella
Carub.0006s1624 10.0kb upstream 10.0kb upstream 11146 true scaffold_6: 6003945-6015090 Capsella rubella
Carub.0006s1624 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6005091-6015090 Capsella rubella
Carub.0006s1624 10.0kb downstream 10.0kb downstream 11146 true scaffold_6: 5993945-6005090 Capsella rubella
Carub.0006s1624 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5993945-6003944 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381327 5261 Brassicaceae View MSA
123803185 5264 Brassicales-Malvales View MSA
124350593 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain