Gene : Carub.0006s3280 C. rubella v1.1
Defline:  (1 of 3) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  3280
Name:  ? Carub.0006s3280 Secondary Identifier:  ? PAC:39247960
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3280 0.5kb upstream 0.5kb upstream 4431 true scaffold_6: 14842679-14847109 Capsella rubella
Carub.0006s3280 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14842679-14843178 Capsella rubella
Carub.0006s3280 0.5kb downstream 0.5kb downstream 4431 true scaffold_6: 14843179-14847609 Capsella rubella
Carub.0006s3280 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14847110-14847609 Capsella rubella
Carub.0006s3280 1.0kb upstream 1.0kb upstream 4931 true scaffold_6: 14842179-14847109 Capsella rubella
Carub.0006s3280 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14842179-14843178 Capsella rubella
Carub.0006s3280 1.0kb downstream 1.0kb downstream 4931 true scaffold_6: 14843179-14848109 Capsella rubella
Carub.0006s3280 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14847110-14848109 Capsella rubella
Carub.0006s3280 2.0kb upstream 2.0kb upstream 5931 true scaffold_6: 14841179-14847109 Capsella rubella
Carub.0006s3280 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14841179-14843178 Capsella rubella
Carub.0006s3280 2.0kb downstream 2.0kb downstream 5931 true scaffold_6: 14843179-14849109 Capsella rubella
Carub.0006s3280 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14847110-14849109 Capsella rubella
Carub.0006s3280 5.0kb upstream 5.0kb upstream 8931 true scaffold_6: 14838179-14847109 Capsella rubella
Carub.0006s3280 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14838179-14843178 Capsella rubella
Carub.0006s3280 5.0kb downstream 5.0kb downstream 8931 true scaffold_6: 14843179-14852109 Capsella rubella
Carub.0006s3280 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14847110-14852109 Capsella rubella
Carub.0006s3280 10.0kb upstream 10.0kb upstream 13931 true scaffold_6: 14833179-14847109 Capsella rubella
Carub.0006s3280 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14833179-14843178 Capsella rubella
Carub.0006s3280 10.0kb downstream 10.0kb downstream 13931 true scaffold_6: 14843179-14857109 Capsella rubella
Carub.0006s3280 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14847110-14857109 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373990 5261 Brassicaceae View MSA
123827998 5264 Brassicales-Malvales View MSA
124346804 5266 SBM View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain