Gene : Carub.0006s3281 C. rubella v1.1
Defline:  (1 of 2) PTHR24326//PTHR24326:SF294 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED Genomic Order:  3281
Name:  ? Carub.0006s3281 Secondary Identifier:  ? PAC:39247116
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3281 0.5kb upstream 0.5kb upstream 6368 true scaffold_6: 14847500-14853867 Capsella rubella
Carub.0006s3281 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14853368-14853867 Capsella rubella
Carub.0006s3281 0.5kb downstream 0.5kb downstream 6368 true scaffold_6: 14847000-14853367 Capsella rubella
Carub.0006s3281 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14847000-14847499 Capsella rubella
Carub.0006s3281 1.0kb upstream 1.0kb upstream 6868 true scaffold_6: 14847500-14854367 Capsella rubella
Carub.0006s3281 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14853368-14854367 Capsella rubella
Carub.0006s3281 1.0kb downstream 1.0kb downstream 6868 true scaffold_6: 14846500-14853367 Capsella rubella
Carub.0006s3281 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14846500-14847499 Capsella rubella
Carub.0006s3281 2.0kb upstream 2.0kb upstream 7868 true scaffold_6: 14847500-14855367 Capsella rubella
Carub.0006s3281 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14853368-14855367 Capsella rubella
Carub.0006s3281 2.0kb downstream 2.0kb downstream 7868 true scaffold_6: 14845500-14853367 Capsella rubella
Carub.0006s3281 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14845500-14847499 Capsella rubella
Carub.0006s3281 5.0kb upstream 5.0kb upstream 10868 true scaffold_6: 14847500-14858367 Capsella rubella
Carub.0006s3281 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14853368-14858367 Capsella rubella
Carub.0006s3281 5.0kb downstream 5.0kb downstream 10868 true scaffold_6: 14842500-14853367 Capsella rubella
Carub.0006s3281 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14842500-14847499 Capsella rubella
Carub.0006s3281 10.0kb upstream 10.0kb upstream 15868 true scaffold_6: 14847500-14863367 Capsella rubella
Carub.0006s3281 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14853368-14863367 Capsella rubella
Carub.0006s3281 10.0kb downstream 10.0kb downstream 15868 true scaffold_6: 14837500-14853367 Capsella rubella
Carub.0006s3281 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14837500-14847499 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373715 5261 Brassicaceae View MSA
123838055 5264 Brassicales-Malvales View MSA
124338505 5266 SBM View MSA
124240663 5268 Malvidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain