Gene : Carub.0006s3313 C. rubella v1.1
Defline:  (1 of 2) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  3313
Name:  ? Carub.0006s3313 Secondary Identifier:  ? PAC:39247296
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3313 0.5kb upstream 0.5kb upstream 1837 true scaffold_6: 15001091-15002927 Capsella rubella
Carub.0006s3313 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15002428-15002927 Capsella rubella
Carub.0006s3313 0.5kb downstream 0.5kb downstream 1837 true scaffold_6: 15000591-15002427 Capsella rubella
Carub.0006s3313 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15000591-15001090 Capsella rubella
Carub.0006s3313 1.0kb upstream 1.0kb upstream 2337 true scaffold_6: 15001091-15003427 Capsella rubella
Carub.0006s3313 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15002428-15003427 Capsella rubella
Carub.0006s3313 1.0kb downstream 1.0kb downstream 2337 true scaffold_6: 15000091-15002427 Capsella rubella
Carub.0006s3313 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15000091-15001090 Capsella rubella
Carub.0006s3313 2.0kb upstream 2.0kb upstream 3337 true scaffold_6: 15001091-15004427 Capsella rubella
Carub.0006s3313 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15002428-15004427 Capsella rubella
Carub.0006s3313 2.0kb downstream 2.0kb downstream 3337 true scaffold_6: 14999091-15002427 Capsella rubella
Carub.0006s3313 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14999091-15001090 Capsella rubella
Carub.0006s3313 5.0kb upstream 5.0kb upstream 6337 true scaffold_6: 15001091-15007427 Capsella rubella
Carub.0006s3313 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15002428-15007427 Capsella rubella
Carub.0006s3313 5.0kb downstream 5.0kb downstream 6337 true scaffold_6: 14996091-15002427 Capsella rubella
Carub.0006s3313 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14996091-15001090 Capsella rubella
Carub.0006s3313 10.0kb upstream 10.0kb upstream 11337 true scaffold_6: 15001091-15012427 Capsella rubella
Carub.0006s3313 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15002428-15012427 Capsella rubella
Carub.0006s3313 10.0kb downstream 10.0kb downstream 11337 true scaffold_6: 14991091-15002427 Capsella rubella
Carub.0006s3313 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14991091-15001090 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363220 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain