Gene : Carub.0006s3311 C. rubella v1.1
Defline:  (1 of 7) K01904 - 4-coumarate--CoA ligase (4CL) Genomic Order:  3311
Name:  ? Carub.0006s3311 Secondary Identifier:  ? PAC:39249478
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3311 0.5kb upstream 0.5kb upstream 2916 true scaffold_6: 14993742-14996657 Capsella rubella
Carub.0006s3311 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14993742-14994241 Capsella rubella
Carub.0006s3311 0.5kb downstream 0.5kb downstream 2916 true scaffold_6: 14994242-14997157 Capsella rubella
Carub.0006s3311 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14996658-14997157 Capsella rubella
Carub.0006s3311 1.0kb upstream 1.0kb upstream 3416 true scaffold_6: 14993242-14996657 Capsella rubella
Carub.0006s3311 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14993242-14994241 Capsella rubella
Carub.0006s3311 1.0kb downstream 1.0kb downstream 3416 true scaffold_6: 14994242-14997657 Capsella rubella
Carub.0006s3311 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14996658-14997657 Capsella rubella
Carub.0006s3311 2.0kb upstream 2.0kb upstream 4416 true scaffold_6: 14992242-14996657 Capsella rubella
Carub.0006s3311 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14992242-14994241 Capsella rubella
Carub.0006s3311 2.0kb downstream 2.0kb downstream 4416 true scaffold_6: 14994242-14998657 Capsella rubella
Carub.0006s3311 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14996658-14998657 Capsella rubella
Carub.0006s3311 5.0kb upstream 5.0kb upstream 7416 true scaffold_6: 14989242-14996657 Capsella rubella
Carub.0006s3311 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14989242-14994241 Capsella rubella
Carub.0006s3311 5.0kb downstream 5.0kb downstream 7416 true scaffold_6: 14994242-15001657 Capsella rubella
Carub.0006s3311 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14996658-15001657 Capsella rubella
Carub.0006s3311 10.0kb upstream 10.0kb upstream 12416 true scaffold_6: 14984242-14996657 Capsella rubella
Carub.0006s3311 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14984242-14994241 Capsella rubella
Carub.0006s3311 10.0kb downstream 10.0kb downstream 12416 true scaffold_6: 14994242-15006657 Capsella rubella
Carub.0006s3311 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14996658-15006657 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363033 5261 Brassicaceae View MSA
123829361 5264 Brassicales-Malvales View MSA
124344127 5266 SBM View MSA
124237090 5268 Malvidae View MSA
124066794 5270 Rosid View MSA
123740977 5271 Pentapetalae View MSA
122792811 5272 Eudicot View MSA
122045114 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain