Gene : Carub.0006s3324 C. rubella v1.1

Defline:  (1 of 2) PTHR23180:SF245 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12-RELATED Genomic Order:  3324
Name:  ? Carub.0006s3324 Secondary Identifier:  ? PAC:39246919

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3324 0.5kb upstream 0.5kb upstream 2715 true scaffold_6: 15031340-15034054 Capsella rubella
Carub.0006s3324 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15033555-15034054 Capsella rubella
Carub.0006s3324 0.5kb downstream 0.5kb downstream 2715 true scaffold_6: 15030840-15033554 Capsella rubella
Carub.0006s3324 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15030840-15031339 Capsella rubella
Carub.0006s3324 1.0kb upstream 1.0kb upstream 3215 true scaffold_6: 15031340-15034554 Capsella rubella
Carub.0006s3324 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15033555-15034554 Capsella rubella
Carub.0006s3324 1.0kb downstream 1.0kb downstream 3215 true scaffold_6: 15030340-15033554 Capsella rubella
Carub.0006s3324 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15030340-15031339 Capsella rubella
Carub.0006s3324 2.0kb upstream 2.0kb upstream 4215 true scaffold_6: 15031340-15035554 Capsella rubella
Carub.0006s3324 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15033555-15035554 Capsella rubella
Carub.0006s3324 2.0kb downstream 2.0kb downstream 4215 true scaffold_6: 15029340-15033554 Capsella rubella
Carub.0006s3324 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15029340-15031339 Capsella rubella
Carub.0006s3324 5.0kb upstream 5.0kb upstream 7215 true scaffold_6: 15031340-15038554 Capsella rubella
Carub.0006s3324 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15033555-15038554 Capsella rubella
Carub.0006s3324 5.0kb downstream 5.0kb downstream 7215 true scaffold_6: 15026340-15033554 Capsella rubella
Carub.0006s3324 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15026340-15031339 Capsella rubella
Carub.0006s3324 10.0kb upstream 10.0kb upstream 12215 true scaffold_6: 15031340-15043554 Capsella rubella
Carub.0006s3324 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15033555-15043554 Capsella rubella
Carub.0006s3324 10.0kb downstream 10.0kb downstream 12215 true scaffold_6: 15021340-15033554 Capsella rubella
Carub.0006s3324 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15021340-15031339 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368466 5261 Brassicaceae View MSA
123838163 5264 Brassicales-Malvales View MSA
124346458 5266 SBM View MSA
124242974 5268 Malvidae View MSA
124061830 5270 Rosid View MSA
123748572 5271 Pentapetalae View MSA
122790257 5272 Eudicot View MSA
122045415 5273 Angiosperm View MSA
121349513 5274 Embryophyte View MSA
123381340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain