Gene : Carub.0006s3118 C. rubella v1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  3118
Name:  ? Carub.0006s3118 Secondary Identifier:  ? PAC:39248659
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3118 0.5kb upstream 0.5kb upstream 2158 true scaffold_6: 14125687-14127844 Capsella rubella
Carub.0006s3118 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14127345-14127844 Capsella rubella
Carub.0006s3118 0.5kb downstream 0.5kb downstream 2158 true scaffold_6: 14125187-14127344 Capsella rubella
Carub.0006s3118 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14125187-14125686 Capsella rubella
Carub.0006s3118 1.0kb upstream 1.0kb upstream 2658 true scaffold_6: 14125687-14128344 Capsella rubella
Carub.0006s3118 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14127345-14128344 Capsella rubella
Carub.0006s3118 1.0kb downstream 1.0kb downstream 2658 true scaffold_6: 14124687-14127344 Capsella rubella
Carub.0006s3118 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14124687-14125686 Capsella rubella
Carub.0006s3118 2.0kb upstream 2.0kb upstream 3658 true scaffold_6: 14125687-14129344 Capsella rubella
Carub.0006s3118 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14127345-14129344 Capsella rubella
Carub.0006s3118 2.0kb downstream 2.0kb downstream 3658 true scaffold_6: 14123687-14127344 Capsella rubella
Carub.0006s3118 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14123687-14125686 Capsella rubella
Carub.0006s3118 5.0kb upstream 5.0kb upstream 6658 true scaffold_6: 14125687-14132344 Capsella rubella
Carub.0006s3118 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14127345-14132344 Capsella rubella
Carub.0006s3118 5.0kb downstream 5.0kb downstream 6658 true scaffold_6: 14120687-14127344 Capsella rubella
Carub.0006s3118 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14120687-14125686 Capsella rubella
Carub.0006s3118 10.0kb upstream 10.0kb upstream 11658 true scaffold_6: 14125687-14137344 Capsella rubella
Carub.0006s3118 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14127345-14137344 Capsella rubella
Carub.0006s3118 10.0kb downstream 10.0kb downstream 11658 true scaffold_6: 14115687-14127344 Capsella rubella
Carub.0006s3118 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14115687-14125686 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370401 5261 Brassicaceae View MSA
123827761 5264 Brassicales-Malvales View MSA
124343132 5266 SBM View MSA
124252123 5268 Malvidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain