Gene : Carub.0006s3155 C. rubella v1.1

Defline:  (1 of 3) K09553 - stress-induced-phosphoprotein 1 (STIP1) Genomic Order:  3155
Name:  ? Carub.0006s3155 Secondary Identifier:  ? PAC:39248712

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3155 0.5kb upstream 0.5kb upstream 3241 true scaffold_6: 14298838-14302078 Capsella rubella
Carub.0006s3155 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14301579-14302078 Capsella rubella
Carub.0006s3155 0.5kb downstream 0.5kb downstream 3241 true scaffold_6: 14298338-14301578 Capsella rubella
Carub.0006s3155 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14298338-14298837 Capsella rubella
Carub.0006s3155 1.0kb upstream 1.0kb upstream 3741 true scaffold_6: 14298838-14302578 Capsella rubella
Carub.0006s3155 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14301579-14302578 Capsella rubella
Carub.0006s3155 1.0kb downstream 1.0kb downstream 3741 true scaffold_6: 14297838-14301578 Capsella rubella
Carub.0006s3155 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14297838-14298837 Capsella rubella
Carub.0006s3155 2.0kb upstream 2.0kb upstream 4741 true scaffold_6: 14298838-14303578 Capsella rubella
Carub.0006s3155 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14301579-14303578 Capsella rubella
Carub.0006s3155 2.0kb downstream 2.0kb downstream 4741 true scaffold_6: 14296838-14301578 Capsella rubella
Carub.0006s3155 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14296838-14298837 Capsella rubella
Carub.0006s3155 5.0kb upstream 5.0kb upstream 7741 true scaffold_6: 14298838-14306578 Capsella rubella
Carub.0006s3155 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14301579-14306578 Capsella rubella
Carub.0006s3155 5.0kb downstream 5.0kb downstream 7741 true scaffold_6: 14293838-14301578 Capsella rubella
Carub.0006s3155 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14293838-14298837 Capsella rubella
Carub.0006s3155 10.0kb upstream 10.0kb upstream 12741 true scaffold_6: 14298838-14311578 Capsella rubella
Carub.0006s3155 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14301579-14311578 Capsella rubella
Carub.0006s3155 10.0kb downstream 10.0kb downstream 12741 true scaffold_6: 14288838-14301578 Capsella rubella
Carub.0006s3155 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14288838-14298837 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362520 5261 Brassicaceae View MSA
123838662 5264 Brassicales-Malvales View MSA
124336628 5266 SBM View MSA
124248162 5268 Malvidae View MSA
124050195 5270 Rosid View MSA
123742862 5271 Pentapetalae View MSA
122790391 5272 Eudicot View MSA
122044378 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121343980 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain