Gene : Carub.0006s3217 C. rubella v1.1
Defline:  (1 of 5) PTHR13018//PTHR13018:SF47 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  3217
Name:  ? Carub.0006s3217 Secondary Identifier:  ? PAC:39249905
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3217 0.5kb upstream 0.5kb upstream 4924 true scaffold_6: 14576955-14581878 Capsella rubella
Carub.0006s3217 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14576955-14577454 Capsella rubella
Carub.0006s3217 0.5kb downstream 0.5kb downstream 4924 true scaffold_6: 14577455-14582378 Capsella rubella
Carub.0006s3217 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14581879-14582378 Capsella rubella
Carub.0006s3217 1.0kb upstream 1.0kb upstream 5424 true scaffold_6: 14576455-14581878 Capsella rubella
Carub.0006s3217 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14576455-14577454 Capsella rubella
Carub.0006s3217 1.0kb downstream 1.0kb downstream 5424 true scaffold_6: 14577455-14582878 Capsella rubella
Carub.0006s3217 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14581879-14582878 Capsella rubella
Carub.0006s3217 2.0kb upstream 2.0kb upstream 6424 true scaffold_6: 14575455-14581878 Capsella rubella
Carub.0006s3217 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14575455-14577454 Capsella rubella
Carub.0006s3217 2.0kb downstream 2.0kb downstream 6424 true scaffold_6: 14577455-14583878 Capsella rubella
Carub.0006s3217 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14581879-14583878 Capsella rubella
Carub.0006s3217 5.0kb upstream 5.0kb upstream 9424 true scaffold_6: 14572455-14581878 Capsella rubella
Carub.0006s3217 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14572455-14577454 Capsella rubella
Carub.0006s3217 5.0kb downstream 5.0kb downstream 9424 true scaffold_6: 14577455-14586878 Capsella rubella
Carub.0006s3217 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14581879-14586878 Capsella rubella
Carub.0006s3217 10.0kb upstream 10.0kb upstream 14424 true scaffold_6: 14567455-14581878 Capsella rubella
Carub.0006s3217 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14567455-14577454 Capsella rubella
Carub.0006s3217 10.0kb downstream 10.0kb downstream 14424 true scaffold_6: 14577455-14591878 Capsella rubella
Carub.0006s3217 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14581879-14591878 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375271 5261 Brassicaceae View MSA
123800917 5264 Brassicales-Malvales View MSA
124298274 5266 SBM View MSA
124149955 5268 Malvidae View MSA
124067604 5270 Rosid View MSA
123747702 5271 Pentapetalae View MSA
122790642 5272 Eudicot View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain