Gene : Carub.0006s3407 C. rubella v1.1
Defline:  (1 of 1) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  3407
Name:  ? Carub.0006s3407 Secondary Identifier:  ? PAC:39249088
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3407 0.5kb upstream 0.5kb upstream 2270 true scaffold_6: 15346095-15348364 Capsella rubella
Carub.0006s3407 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15346095-15346594 Capsella rubella
Carub.0006s3407 0.5kb downstream 0.5kb downstream 2270 true scaffold_6: 15346595-15348864 Capsella rubella
Carub.0006s3407 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15348365-15348864 Capsella rubella
Carub.0006s3407 1.0kb upstream 1.0kb upstream 2770 true scaffold_6: 15345595-15348364 Capsella rubella
Carub.0006s3407 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15345595-15346594 Capsella rubella
Carub.0006s3407 1.0kb downstream 1.0kb downstream 2770 true scaffold_6: 15346595-15349364 Capsella rubella
Carub.0006s3407 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15348365-15349364 Capsella rubella
Carub.0006s3407 2.0kb upstream 2.0kb upstream 3770 true scaffold_6: 15344595-15348364 Capsella rubella
Carub.0006s3407 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15344595-15346594 Capsella rubella
Carub.0006s3407 2.0kb downstream 2.0kb downstream 3770 true scaffold_6: 15346595-15350364 Capsella rubella
Carub.0006s3407 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15348365-15350364 Capsella rubella
Carub.0006s3407 5.0kb upstream 5.0kb upstream 6770 true scaffold_6: 15341595-15348364 Capsella rubella
Carub.0006s3407 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15341595-15346594 Capsella rubella
Carub.0006s3407 5.0kb downstream 5.0kb downstream 6770 true scaffold_6: 15346595-15353364 Capsella rubella
Carub.0006s3407 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15348365-15353364 Capsella rubella
Carub.0006s3407 10.0kb upstream 10.0kb upstream 11770 true scaffold_6: 15336595-15348364 Capsella rubella
Carub.0006s3407 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15336595-15346594 Capsella rubella
Carub.0006s3407 10.0kb downstream 10.0kb downstream 11770 true scaffold_6: 15346595-15358364 Capsella rubella
Carub.0006s3407 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15348365-15358364 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369036 5261 Brassicaceae View MSA
123841219 5264 Brassicales-Malvales View MSA
124338693 5266 SBM View MSA
124239302 5268 Malvidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain