Gene : Carub.0006s2677 C. rubella v1.1
Defline:  (1 of 1) 4.1.1.25//4.1.1.28 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase // Aromatic-L-amino-acid decarboxylase / Tryptophan decarboxylase Genomic Order:  2677
Name:  ? Carub.0006s2677 Secondary Identifier:  ? PAC:39246831
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6030 Capsella rubella pathologic  
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2677 0.5kb upstream 0.5kb upstream 1786 true scaffold_6: 11879093-11880878 Capsella rubella
Carub.0006s2677 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 11879093-11879592 Capsella rubella
Carub.0006s2677 0.5kb downstream 0.5kb downstream 1786 true scaffold_6: 11879593-11881378 Capsella rubella
Carub.0006s2677 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 11880879-11881378 Capsella rubella
Carub.0006s2677 1.0kb upstream 1.0kb upstream 2286 true scaffold_6: 11878593-11880878 Capsella rubella
Carub.0006s2677 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 11878593-11879592 Capsella rubella
Carub.0006s2677 1.0kb downstream 1.0kb downstream 2286 true scaffold_6: 11879593-11881878 Capsella rubella
Carub.0006s2677 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 11880879-11881878 Capsella rubella
Carub.0006s2677 2.0kb upstream 2.0kb upstream 3286 true scaffold_6: 11877593-11880878 Capsella rubella
Carub.0006s2677 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 11877593-11879592 Capsella rubella
Carub.0006s2677 2.0kb downstream 2.0kb downstream 3286 true scaffold_6: 11879593-11882878 Capsella rubella
Carub.0006s2677 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 11880879-11882878 Capsella rubella
Carub.0006s2677 5.0kb upstream 5.0kb upstream 6286 true scaffold_6: 11874593-11880878 Capsella rubella
Carub.0006s2677 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 11874593-11879592 Capsella rubella
Carub.0006s2677 5.0kb downstream 5.0kb downstream 6286 true scaffold_6: 11879593-11885878 Capsella rubella
Carub.0006s2677 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 11880879-11885878 Capsella rubella
Carub.0006s2677 10.0kb upstream 10.0kb upstream 11286 true scaffold_6: 11869593-11880878 Capsella rubella
Carub.0006s2677 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 11869593-11879592 Capsella rubella
Carub.0006s2677 10.0kb downstream 10.0kb downstream 11286 true scaffold_6: 11879593-11890878 Capsella rubella
Carub.0006s2677 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 11880879-11890878 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366897 5261 Brassicaceae View MSA
123833264 5264 Brassicales-Malvales View MSA
124340489 5266 SBM View MSA
124242957 5268 Malvidae View MSA
124066904 5270 Rosid View MSA
123739250 5271 Pentapetalae View MSA
122788095 5272 Eudicot View MSA
122042789 5273 Angiosperm View MSA
121345472 5274 Embryophyte View MSA
123380224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain