Gene : Carub.0006s2915 C. rubella v1.1
Defline:  (1 of 2) PTHR22814//PTHR22814:SF136 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2915
Name:  ? Carub.0006s2915 Secondary Identifier:  ? PAC:39247142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2915 0.5kb upstream 0.5kb upstream 1957 true scaffold_6: 13225483-13227439 Capsella rubella
Carub.0006s2915 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13226940-13227439 Capsella rubella
Carub.0006s2915 0.5kb downstream 0.5kb downstream 1957 true scaffold_6: 13224983-13226939 Capsella rubella
Carub.0006s2915 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13224983-13225482 Capsella rubella
Carub.0006s2915 1.0kb upstream 1.0kb upstream 2457 true scaffold_6: 13225483-13227939 Capsella rubella
Carub.0006s2915 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13226940-13227939 Capsella rubella
Carub.0006s2915 1.0kb downstream 1.0kb downstream 2457 true scaffold_6: 13224483-13226939 Capsella rubella
Carub.0006s2915 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13224483-13225482 Capsella rubella
Carub.0006s2915 2.0kb upstream 2.0kb upstream 3457 true scaffold_6: 13225483-13228939 Capsella rubella
Carub.0006s2915 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13226940-13228939 Capsella rubella
Carub.0006s2915 2.0kb downstream 2.0kb downstream 3457 true scaffold_6: 13223483-13226939 Capsella rubella
Carub.0006s2915 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13223483-13225482 Capsella rubella
Carub.0006s2915 5.0kb upstream 5.0kb upstream 6457 true scaffold_6: 13225483-13231939 Capsella rubella
Carub.0006s2915 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13226940-13231939 Capsella rubella
Carub.0006s2915 5.0kb downstream 5.0kb downstream 6457 true scaffold_6: 13220483-13226939 Capsella rubella
Carub.0006s2915 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13220483-13225482 Capsella rubella
Carub.0006s2915 10.0kb upstream 10.0kb upstream 11457 true scaffold_6: 13225483-13236939 Capsella rubella
Carub.0006s2915 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13226940-13236939 Capsella rubella
Carub.0006s2915 10.0kb downstream 10.0kb downstream 11457 true scaffold_6: 13215483-13226939 Capsella rubella
Carub.0006s2915 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13215483-13225482 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379093 5261 Brassicaceae View MSA
123802095 5264 Brassicales-Malvales View MSA
124299316 5266 SBM View MSA
124150764 5268 Malvidae View MSA
123876325 5270 Rosid View MSA
123743604 5271 Pentapetalae View MSA
122788291 5272 Eudicot View MSA
122046308 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain