Gene : Carub.0006s2943 C. rubella v1.1
Defline:  (1 of 2) PTHR11089//PTHR11089:SF38 - GTP-BINDING PROTEIN-RELATED // GTP BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2 Genomic Order:  2943
Name:  ? Carub.0006s2943 Secondary Identifier:  ? PAC:39247314
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6845 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2943 0.5kb upstream 0.5kb upstream 2685 true scaffold_6: 13353510-13356194 Capsella rubella
Carub.0006s2943 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13353510-13354009 Capsella rubella
Carub.0006s2943 0.5kb downstream 0.5kb downstream 2685 true scaffold_6: 13354010-13356694 Capsella rubella
Carub.0006s2943 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13356195-13356694 Capsella rubella
Carub.0006s2943 1.0kb upstream 1.0kb upstream 3185 true scaffold_6: 13353010-13356194 Capsella rubella
Carub.0006s2943 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13353010-13354009 Capsella rubella
Carub.0006s2943 1.0kb downstream 1.0kb downstream 3185 true scaffold_6: 13354010-13357194 Capsella rubella
Carub.0006s2943 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13356195-13357194 Capsella rubella
Carub.0006s2943 2.0kb upstream 2.0kb upstream 4185 true scaffold_6: 13352010-13356194 Capsella rubella
Carub.0006s2943 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13352010-13354009 Capsella rubella
Carub.0006s2943 2.0kb downstream 2.0kb downstream 4185 true scaffold_6: 13354010-13358194 Capsella rubella
Carub.0006s2943 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13356195-13358194 Capsella rubella
Carub.0006s2943 5.0kb upstream 5.0kb upstream 7185 true scaffold_6: 13349010-13356194 Capsella rubella
Carub.0006s2943 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13349010-13354009 Capsella rubella
Carub.0006s2943 5.0kb downstream 5.0kb downstream 7185 true scaffold_6: 13354010-13361194 Capsella rubella
Carub.0006s2943 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13356195-13361194 Capsella rubella
Carub.0006s2943 10.0kb upstream 10.0kb upstream 12185 true scaffold_6: 13344010-13356194 Capsella rubella
Carub.0006s2943 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13344010-13354009 Capsella rubella
Carub.0006s2943 10.0kb downstream 10.0kb downstream 12185 true scaffold_6: 13354010-13366194 Capsella rubella
Carub.0006s2943 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13356195-13366194 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373368 5261 Brassicaceae View MSA
123830932 5264 Brassicales-Malvales View MSA
124343856 5266 SBM View MSA
124237559 5268 Malvidae View MSA
124060603 5270 Rosid View MSA
123736474 5271 Pentapetalae View MSA
122788419 5272 Eudicot View MSA
122042664 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain