Gene : Carub.0006s2969 C. rubella v1.1
Defline:  (1 of 1) PTHR22835:SF281 - SGNH HYDROLASE-TYPE ESTERASE SUPERFAMILY PROTEIN Genomic Order:  2969
Name:  ? Carub.0006s2969 Secondary Identifier:  ? PAC:39246287
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2969 0.5kb upstream 0.5kb upstream 2694 true scaffold_6: 13462882-13465575 Capsella rubella
Carub.0006s2969 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13465076-13465575 Capsella rubella
Carub.0006s2969 0.5kb downstream 0.5kb downstream 2694 true scaffold_6: 13462382-13465075 Capsella rubella
Carub.0006s2969 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13462382-13462881 Capsella rubella
Carub.0006s2969 1.0kb upstream 1.0kb upstream 3194 true scaffold_6: 13462882-13466075 Capsella rubella
Carub.0006s2969 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13465076-13466075 Capsella rubella
Carub.0006s2969 1.0kb downstream 1.0kb downstream 3194 true scaffold_6: 13461882-13465075 Capsella rubella
Carub.0006s2969 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13461882-13462881 Capsella rubella
Carub.0006s2969 2.0kb upstream 2.0kb upstream 4194 true scaffold_6: 13462882-13467075 Capsella rubella
Carub.0006s2969 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13465076-13467075 Capsella rubella
Carub.0006s2969 2.0kb downstream 2.0kb downstream 4194 true scaffold_6: 13460882-13465075 Capsella rubella
Carub.0006s2969 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13460882-13462881 Capsella rubella
Carub.0006s2969 5.0kb upstream 5.0kb upstream 7194 true scaffold_6: 13462882-13470075 Capsella rubella
Carub.0006s2969 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13465076-13470075 Capsella rubella
Carub.0006s2969 5.0kb downstream 5.0kb downstream 7194 true scaffold_6: 13457882-13465075 Capsella rubella
Carub.0006s2969 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13457882-13462881 Capsella rubella
Carub.0006s2969 10.0kb upstream 10.0kb upstream 12194 true scaffold_6: 13462882-13475075 Capsella rubella
Carub.0006s2969 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13465076-13475075 Capsella rubella
Carub.0006s2969 10.0kb downstream 10.0kb downstream 12194 true scaffold_6: 13452882-13465075 Capsella rubella
Carub.0006s2969 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13452882-13462881 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366964 5261 Brassicaceae View MSA
123832102 5264 Brassicales-Malvales View MSA
124339960 5266 SBM View MSA
124248753 5268 Malvidae View MSA
124070945 5270 Rosid View MSA
123742824 5271 Pentapetalae View MSA
122794497 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain