Gene : Carub.0006s3071 C. rubella v1.1
Defline:  (1 of 1) PTHR10024//PTHR10024:SF225 - SYNAPTOTAGMIN // C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  3071
Name:  ? Carub.0006s3071 Secondary Identifier:  ? PAC:39246560
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3071 0.5kb upstream 0.5kb upstream 4322 true scaffold_6: 13894986-13899307 Capsella rubella
Carub.0006s3071 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13898808-13899307 Capsella rubella
Carub.0006s3071 0.5kb downstream 0.5kb downstream 4322 true scaffold_6: 13894486-13898807 Capsella rubella
Carub.0006s3071 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13894486-13894985 Capsella rubella
Carub.0006s3071 1.0kb upstream 1.0kb upstream 4822 true scaffold_6: 13894986-13899807 Capsella rubella
Carub.0006s3071 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13898808-13899807 Capsella rubella
Carub.0006s3071 1.0kb downstream 1.0kb downstream 4822 true scaffold_6: 13893986-13898807 Capsella rubella
Carub.0006s3071 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13893986-13894985 Capsella rubella
Carub.0006s3071 2.0kb upstream 2.0kb upstream 5822 true scaffold_6: 13894986-13900807 Capsella rubella
Carub.0006s3071 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13898808-13900807 Capsella rubella
Carub.0006s3071 2.0kb downstream 2.0kb downstream 5822 true scaffold_6: 13892986-13898807 Capsella rubella
Carub.0006s3071 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13892986-13894985 Capsella rubella
Carub.0006s3071 5.0kb upstream 5.0kb upstream 8822 true scaffold_6: 13894986-13903807 Capsella rubella
Carub.0006s3071 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13898808-13903807 Capsella rubella
Carub.0006s3071 5.0kb downstream 5.0kb downstream 8822 true scaffold_6: 13889986-13898807 Capsella rubella
Carub.0006s3071 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13889986-13894985 Capsella rubella
Carub.0006s3071 10.0kb upstream 10.0kb upstream 13822 true scaffold_6: 13894986-13908807 Capsella rubella
Carub.0006s3071 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13898808-13908807 Capsella rubella
Carub.0006s3071 10.0kb downstream 10.0kb downstream 13822 true scaffold_6: 13884986-13898807 Capsella rubella
Carub.0006s3071 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13884986-13894985 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360645 5261 Brassicaceae View MSA
123834352 5264 Brassicales-Malvales View MSA
124337277 5266 SBM View MSA
124243471 5268 Malvidae View MSA
124071853 5270 Rosid View MSA
123744879 5271 Pentapetalae View MSA
122793721 5272 Eudicot View MSA
122045075 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain