Gene : Carub.0006s3094 C. rubella v1.1
Defline:  (1 of 2) PTHR18896//PTHR18896:SF65 - PHOSPHOLIPASE D // PHOSPHOLIPASE D BETA 1-RELATED Genomic Order:  3094
Name:  ? Carub.0006s3094 Secondary Identifier:  ? PAC:39246545
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  
Crubella PWY-3561 Capsella rubella pathologic  
Crubella PWY-7039 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3094 0.5kb upstream 0.5kb upstream 4998 true scaffold_6: 14010891-14015888 Capsella rubella
Carub.0006s3094 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14015389-14015888 Capsella rubella
Carub.0006s3094 0.5kb downstream 0.5kb downstream 4998 true scaffold_6: 14010391-14015388 Capsella rubella
Carub.0006s3094 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14010391-14010890 Capsella rubella
Carub.0006s3094 1.0kb upstream 1.0kb upstream 5498 true scaffold_6: 14010891-14016388 Capsella rubella
Carub.0006s3094 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14015389-14016388 Capsella rubella
Carub.0006s3094 1.0kb downstream 1.0kb downstream 5498 true scaffold_6: 14009891-14015388 Capsella rubella
Carub.0006s3094 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14009891-14010890 Capsella rubella
Carub.0006s3094 2.0kb upstream 2.0kb upstream 6498 true scaffold_6: 14010891-14017388 Capsella rubella
Carub.0006s3094 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14015389-14017388 Capsella rubella
Carub.0006s3094 2.0kb downstream 2.0kb downstream 6498 true scaffold_6: 14008891-14015388 Capsella rubella
Carub.0006s3094 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14008891-14010890 Capsella rubella
Carub.0006s3094 5.0kb upstream 5.0kb upstream 9498 true scaffold_6: 14010891-14020388 Capsella rubella
Carub.0006s3094 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14015389-14020388 Capsella rubella
Carub.0006s3094 5.0kb downstream 5.0kb downstream 9498 true scaffold_6: 14005891-14015388 Capsella rubella
Carub.0006s3094 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14005891-14010890 Capsella rubella
Carub.0006s3094 10.0kb upstream 10.0kb upstream 14498 true scaffold_6: 14010891-14025388 Capsella rubella
Carub.0006s3094 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14015389-14025388 Capsella rubella
Carub.0006s3094 10.0kb downstream 10.0kb downstream 14498 true scaffold_6: 14000891-14015388 Capsella rubella
Carub.0006s3094 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14000891-14010890 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374010 5261 Brassicaceae View MSA
123838904 5264 Brassicales-Malvales View MSA
124342671 5266 SBM View MSA
124247063 5268 Malvidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain