Gene : Carub.0006s2573 C. rubella v1.1
Defline:  (1 of 4) PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  2573
Name:  ? Carub.0006s2573 Secondary Identifier:  ? PAC:39246078
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2573 0.5kb upstream 0.5kb upstream 1193 true scaffold_6: 10028204-10029396 Capsella rubella
Carub.0006s2573 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 10028897-10029396 Capsella rubella
Carub.0006s2573 0.5kb downstream 0.5kb downstream 1193 true scaffold_6: 10027704-10028896 Capsella rubella
Carub.0006s2573 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 10027704-10028203 Capsella rubella
Carub.0006s2573 1.0kb upstream 1.0kb upstream 1693 true scaffold_6: 10028204-10029896 Capsella rubella
Carub.0006s2573 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 10028897-10029896 Capsella rubella
Carub.0006s2573 1.0kb downstream 1.0kb downstream 1693 true scaffold_6: 10027204-10028896 Capsella rubella
Carub.0006s2573 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 10027204-10028203 Capsella rubella
Carub.0006s2573 2.0kb upstream 2.0kb upstream 2693 true scaffold_6: 10028204-10030896 Capsella rubella
Carub.0006s2573 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 10028897-10030896 Capsella rubella
Carub.0006s2573 2.0kb downstream 2.0kb downstream 2693 true scaffold_6: 10026204-10028896 Capsella rubella
Carub.0006s2573 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 10026204-10028203 Capsella rubella
Carub.0006s2573 5.0kb upstream 5.0kb upstream 5693 true scaffold_6: 10028204-10033896 Capsella rubella
Carub.0006s2573 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 10028897-10033896 Capsella rubella
Carub.0006s2573 5.0kb downstream 5.0kb downstream 5693 true scaffold_6: 10023204-10028896 Capsella rubella
Carub.0006s2573 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 10023204-10028203 Capsella rubella
Carub.0006s2573 10.0kb upstream 10.0kb upstream 10693 true scaffold_6: 10028204-10038896 Capsella rubella
Carub.0006s2573 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 10028897-10038896 Capsella rubella
Carub.0006s2573 10.0kb downstream 10.0kb downstream 10693 true scaffold_6: 10018204-10028896 Capsella rubella
Carub.0006s2573 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 10018204-10028203 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377291 5261 Brassicaceae View MSA
123839186 5264 Brassicales-Malvales View MSA
124337661 5266 SBM View MSA
124244960 5268 Malvidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain