Gene : Carub.0006s2602 C. rubella v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF90 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // BASIC LEUCINE ZIPPER 63 Genomic Order:  2602
Name:  ? Carub.0006s2602 Secondary Identifier:  ? PAC:39246333
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2602 0.5kb upstream 0.5kb upstream 2307 true scaffold_6: 10563831-10566137 Capsella rubella
Carub.0006s2602 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 10565638-10566137 Capsella rubella
Carub.0006s2602 0.5kb downstream 0.5kb downstream 2307 true scaffold_6: 10563331-10565637 Capsella rubella
Carub.0006s2602 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 10563331-10563830 Capsella rubella
Carub.0006s2602 1.0kb upstream 1.0kb upstream 2807 true scaffold_6: 10563831-10566637 Capsella rubella
Carub.0006s2602 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 10565638-10566637 Capsella rubella
Carub.0006s2602 1.0kb downstream 1.0kb downstream 2807 true scaffold_6: 10562831-10565637 Capsella rubella
Carub.0006s2602 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 10562831-10563830 Capsella rubella
Carub.0006s2602 2.0kb upstream 2.0kb upstream 3807 true scaffold_6: 10563831-10567637 Capsella rubella
Carub.0006s2602 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 10565638-10567637 Capsella rubella
Carub.0006s2602 2.0kb downstream 2.0kb downstream 3807 true scaffold_6: 10561831-10565637 Capsella rubella
Carub.0006s2602 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 10561831-10563830 Capsella rubella
Carub.0006s2602 5.0kb upstream 5.0kb upstream 6807 true scaffold_6: 10563831-10570637 Capsella rubella
Carub.0006s2602 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 10565638-10570637 Capsella rubella
Carub.0006s2602 5.0kb downstream 5.0kb downstream 6807 true scaffold_6: 10558831-10565637 Capsella rubella
Carub.0006s2602 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 10558831-10563830 Capsella rubella
Carub.0006s2602 10.0kb upstream 10.0kb upstream 11807 true scaffold_6: 10563831-10575637 Capsella rubella
Carub.0006s2602 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 10565638-10575637 Capsella rubella
Carub.0006s2602 10.0kb downstream 10.0kb downstream 11807 true scaffold_6: 10553831-10565637 Capsella rubella
Carub.0006s2602 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 10553831-10563830 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377679 5261 Brassicaceae View MSA
123835771 5264 Brassicales-Malvales View MSA
124349022 5266 SBM View MSA
124245191 5268 Malvidae View MSA
124072253 5270 Rosid View MSA
123743642 5271 Pentapetalae View MSA
122785904 5272 Eudicot View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain