Gene : Carub.0006s2998 C. rubella v1.1
Defline:  (1 of 3) K02150 - V-type H+-transporting ATPase subunit E (ATPeV1E, ATP6E) Genomic Order:  2998
Name:  ? Carub.0006s2998 Secondary Identifier:  ? PAC:39249393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2998 0.5kb upstream 0.5kb upstream 2355 true scaffold_6: 13588150-13590504 Capsella rubella
Carub.0006s2998 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13588150-13588649 Capsella rubella
Carub.0006s2998 0.5kb downstream 0.5kb downstream 2355 true scaffold_6: 13588650-13591004 Capsella rubella
Carub.0006s2998 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13590505-13591004 Capsella rubella
Carub.0006s2998 1.0kb upstream 1.0kb upstream 2855 true scaffold_6: 13587650-13590504 Capsella rubella
Carub.0006s2998 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13587650-13588649 Capsella rubella
Carub.0006s2998 1.0kb downstream 1.0kb downstream 2855 true scaffold_6: 13588650-13591504 Capsella rubella
Carub.0006s2998 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13590505-13591504 Capsella rubella
Carub.0006s2998 2.0kb upstream 2.0kb upstream 3855 true scaffold_6: 13586650-13590504 Capsella rubella
Carub.0006s2998 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13586650-13588649 Capsella rubella
Carub.0006s2998 2.0kb downstream 2.0kb downstream 3855 true scaffold_6: 13588650-13592504 Capsella rubella
Carub.0006s2998 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13590505-13592504 Capsella rubella
Carub.0006s2998 5.0kb upstream 5.0kb upstream 6855 true scaffold_6: 13583650-13590504 Capsella rubella
Carub.0006s2998 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13583650-13588649 Capsella rubella
Carub.0006s2998 5.0kb downstream 5.0kb downstream 6855 true scaffold_6: 13588650-13595504 Capsella rubella
Carub.0006s2998 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13590505-13595504 Capsella rubella
Carub.0006s2998 10.0kb upstream 10.0kb upstream 11855 true scaffold_6: 13578650-13590504 Capsella rubella
Carub.0006s2998 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13578650-13588649 Capsella rubella
Carub.0006s2998 10.0kb downstream 10.0kb downstream 11855 true scaffold_6: 13588650-13600504 Capsella rubella
Carub.0006s2998 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13590505-13600504 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371622 5261 Brassicaceae View MSA
123838830 5264 Brassicales-Malvales View MSA
124343315 5266 SBM View MSA
124252976 5268 Malvidae View MSA
124072074 5270 Rosid View MSA
123749276 5271 Pentapetalae View MSA
122786311 5272 Eudicot View MSA
122044721 5273 Angiosperm View MSA
121345391 5274 Embryophyte View MSA
123424200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain