Gene : Carub.0006s2359 C. rubella v1.1
Defline:  (1 of 3) PTHR11062//PTHR11062:SF108 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  2359
Name:  ? Carub.0006s2359 Secondary Identifier:  ? PAC:39249208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5980 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2359 0.5kb upstream 0.5kb upstream 3572 true scaffold_6: 8981036-8984607 Capsella rubella
Carub.0006s2359 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8984108-8984607 Capsella rubella
Carub.0006s2359 0.5kb downstream 0.5kb downstream 3572 true scaffold_6: 8980536-8984107 Capsella rubella
Carub.0006s2359 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8980536-8981035 Capsella rubella
Carub.0006s2359 1.0kb upstream 1.0kb upstream 4072 true scaffold_6: 8981036-8985107 Capsella rubella
Carub.0006s2359 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8984108-8985107 Capsella rubella
Carub.0006s2359 1.0kb downstream 1.0kb downstream 4072 true scaffold_6: 8980036-8984107 Capsella rubella
Carub.0006s2359 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8980036-8981035 Capsella rubella
Carub.0006s2359 2.0kb upstream 2.0kb upstream 5072 true scaffold_6: 8981036-8986107 Capsella rubella
Carub.0006s2359 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8984108-8986107 Capsella rubella
Carub.0006s2359 2.0kb downstream 2.0kb downstream 5072 true scaffold_6: 8979036-8984107 Capsella rubella
Carub.0006s2359 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8979036-8981035 Capsella rubella
Carub.0006s2359 5.0kb upstream 5.0kb upstream 8072 true scaffold_6: 8981036-8989107 Capsella rubella
Carub.0006s2359 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8984108-8989107 Capsella rubella
Carub.0006s2359 5.0kb downstream 5.0kb downstream 8072 true scaffold_6: 8976036-8984107 Capsella rubella
Carub.0006s2359 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8976036-8981035 Capsella rubella
Carub.0006s2359 10.0kb upstream 10.0kb upstream 13072 true scaffold_6: 8981036-8994107 Capsella rubella
Carub.0006s2359 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8984108-8994107 Capsella rubella
Carub.0006s2359 10.0kb downstream 10.0kb downstream 13072 true scaffold_6: 8971036-8984107 Capsella rubella
Carub.0006s2359 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8971036-8981035 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122372180 5261 Brassicaceae View MSA
123830917 5264 Brassicales-Malvales View MSA
124349695 5266 SBM View MSA
124250724 5268 Malvidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain