Gene : Carub.0007s0941 C. rubella v1.1

Defline:  (1 of 2) K02516 - protein arginine N-methyltransferase 5 (PRMT5, HSL7) Genomic Order:  941
Name:  ? Carub.0007s0941 Secondary Identifier:  ? PAC:39232742

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0941 0.5kb upstream 0.5kb upstream 5459 true scaffold_7: 3584952-3590410 Capsella rubella
Carub.0007s0941 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3584952-3585451 Capsella rubella
Carub.0007s0941 0.5kb downstream 0.5kb downstream 5459 true scaffold_7: 3585452-3590910 Capsella rubella
Carub.0007s0941 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3590411-3590910 Capsella rubella
Carub.0007s0941 1.0kb upstream 1.0kb upstream 5959 true scaffold_7: 3584452-3590410 Capsella rubella
Carub.0007s0941 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3584452-3585451 Capsella rubella
Carub.0007s0941 1.0kb downstream 1.0kb downstream 5959 true scaffold_7: 3585452-3591410 Capsella rubella
Carub.0007s0941 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3590411-3591410 Capsella rubella
Carub.0007s0941 2.0kb upstream 2.0kb upstream 6959 true scaffold_7: 3583452-3590410 Capsella rubella
Carub.0007s0941 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3583452-3585451 Capsella rubella
Carub.0007s0941 2.0kb downstream 2.0kb downstream 6959 true scaffold_7: 3585452-3592410 Capsella rubella
Carub.0007s0941 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3590411-3592410 Capsella rubella
Carub.0007s0941 5.0kb upstream 5.0kb upstream 9959 true scaffold_7: 3580452-3590410 Capsella rubella
Carub.0007s0941 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3580452-3585451 Capsella rubella
Carub.0007s0941 5.0kb downstream 5.0kb downstream 9959 true scaffold_7: 3585452-3595410 Capsella rubella
Carub.0007s0941 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3590411-3595410 Capsella rubella
Carub.0007s0941 10.0kb upstream 10.0kb upstream 14959 true scaffold_7: 3575452-3590410 Capsella rubella
Carub.0007s0941 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3575452-3585451 Capsella rubella
Carub.0007s0941 10.0kb downstream 10.0kb downstream 14959 true scaffold_7: 3585452-3600410 Capsella rubella
Carub.0007s0941 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3590411-3600410 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040970 5273 Angiosperm View MSA
122375881 5261 Brassicaceae View MSA
123832232 5264 Brassicales-Malvales View MSA
124341841 5266 SBM View MSA
124241733 5268 Malvidae View MSA
124068246 5270 Rosid View MSA
123750655 5271 Pentapetalae View MSA
122786327 5272 Eudicot View MSA
121345711 5274 Embryophyte View MSA
123425938 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain