Gene : Carub.0006s1498 C. rubella v1.1
Defline:  (1 of 1) PTHR14217//PTHR14217:SF5 - FAMILY NOT NAMED // INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 Genomic Order:  1498
Name:  ? Carub.0006s1498 Secondary Identifier:  ? PAC:39248734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6365 Capsella rubella pathologic  
Crubella PWY-6366 Capsella rubella pathologic  
Crubella PWY-6554 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1498 0.5kb upstream 0.5kb upstream 1460 true scaffold_6: 5551161-5552620 Capsella rubella
Carub.0006s1498 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5551161-5551660 Capsella rubella
Carub.0006s1498 0.5kb downstream 0.5kb downstream 1460 true scaffold_6: 5551661-5553120 Capsella rubella
Carub.0006s1498 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5552621-5553120 Capsella rubella
Carub.0006s1498 1.0kb upstream 1.0kb upstream 1960 true scaffold_6: 5550661-5552620 Capsella rubella
Carub.0006s1498 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5550661-5551660 Capsella rubella
Carub.0006s1498 1.0kb downstream 1.0kb downstream 1960 true scaffold_6: 5551661-5553620 Capsella rubella
Carub.0006s1498 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5552621-5553620 Capsella rubella
Carub.0006s1498 2.0kb upstream 2.0kb upstream 2960 true scaffold_6: 5549661-5552620 Capsella rubella
Carub.0006s1498 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5549661-5551660 Capsella rubella
Carub.0006s1498 2.0kb downstream 2.0kb downstream 2960 true scaffold_6: 5551661-5554620 Capsella rubella
Carub.0006s1498 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5552621-5554620 Capsella rubella
Carub.0006s1498 5.0kb upstream 5.0kb upstream 5960 true scaffold_6: 5546661-5552620 Capsella rubella
Carub.0006s1498 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5546661-5551660 Capsella rubella
Carub.0006s1498 5.0kb downstream 5.0kb downstream 5960 true scaffold_6: 5551661-5557620 Capsella rubella
Carub.0006s1498 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5552621-5557620 Capsella rubella
Carub.0006s1498 10.0kb upstream 10.0kb upstream 10960 true scaffold_6: 5541661-5552620 Capsella rubella
Carub.0006s1498 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5541661-5551660 Capsella rubella
Carub.0006s1498 10.0kb downstream 10.0kb downstream 10960 true scaffold_6: 5551661-5562620 Capsella rubella
Carub.0006s1498 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5552621-5562620 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374022 5261 Brassicaceae View MSA
123839978 5264 Brassicales-Malvales View MSA
124343476 5266 SBM View MSA
124253590 5268 Malvidae View MSA
124070914 5270 Rosid View MSA
123749813 5271 Pentapetalae View MSA
122787239 5272 Eudicot View MSA
122047492 5273 Angiosperm View MSA
121347186 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain