Gene : Carub.0006s1517 C. rubella v1.1
Defline:  (1 of 3) PTHR11695//PTHR11695:SF564 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1517
Name:  ? Carub.0006s1517 Secondary Identifier:  ? PAC:39246632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1517 0.5kb upstream 0.5kb upstream 1897 true scaffold_6: 5613892-5615788 Capsella rubella
Carub.0006s1517 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5615289-5615788 Capsella rubella
Carub.0006s1517 0.5kb downstream 0.5kb downstream 1897 true scaffold_6: 5613392-5615288 Capsella rubella
Carub.0006s1517 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5613392-5613891 Capsella rubella
Carub.0006s1517 1.0kb upstream 1.0kb upstream 2397 true scaffold_6: 5613892-5616288 Capsella rubella
Carub.0006s1517 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5615289-5616288 Capsella rubella
Carub.0006s1517 1.0kb downstream 1.0kb downstream 2397 true scaffold_6: 5612892-5615288 Capsella rubella
Carub.0006s1517 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5612892-5613891 Capsella rubella
Carub.0006s1517 2.0kb upstream 2.0kb upstream 3397 true scaffold_6: 5613892-5617288 Capsella rubella
Carub.0006s1517 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5615289-5617288 Capsella rubella
Carub.0006s1517 2.0kb downstream 2.0kb downstream 3397 true scaffold_6: 5611892-5615288 Capsella rubella
Carub.0006s1517 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5611892-5613891 Capsella rubella
Carub.0006s1517 5.0kb upstream 5.0kb upstream 6397 true scaffold_6: 5613892-5620288 Capsella rubella
Carub.0006s1517 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5615289-5620288 Capsella rubella
Carub.0006s1517 5.0kb downstream 5.0kb downstream 6397 true scaffold_6: 5608892-5615288 Capsella rubella
Carub.0006s1517 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5608892-5613891 Capsella rubella
Carub.0006s1517 10.0kb upstream 10.0kb upstream 11397 true scaffold_6: 5613892-5625288 Capsella rubella
Carub.0006s1517 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5615289-5625288 Capsella rubella
Carub.0006s1517 10.0kb downstream 10.0kb downstream 11397 true scaffold_6: 5603892-5615288 Capsella rubella
Carub.0006s1517 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5603892-5613891 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371328 5261 Brassicaceae View MSA
123800144 5264 Brassicales-Malvales View MSA
124297592 5266 SBM View MSA
124248485 5268 Malvidae View MSA
124067817 5270 Rosid View MSA
123751695 5271 Pentapetalae View MSA
122796065 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain