Gene : Carub.0007s0458 C. rubella v1.1

Genomic Order:  458 Name:  ? Carub.0007s0458
Secondary Identifier:  ? PAC:39232986

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0458 0.5kb upstream 0.5kb upstream 1460 true scaffold_7: 1723189-1724648 Capsella rubella
Carub.0007s0458 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1724149-1724648 Capsella rubella
Carub.0007s0458 0.5kb downstream 0.5kb downstream 1460 true scaffold_7: 1722689-1724148 Capsella rubella
Carub.0007s0458 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1722689-1723188 Capsella rubella
Carub.0007s0458 1.0kb upstream 1.0kb upstream 1960 true scaffold_7: 1723189-1725148 Capsella rubella
Carub.0007s0458 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1724149-1725148 Capsella rubella
Carub.0007s0458 1.0kb downstream 1.0kb downstream 1960 true scaffold_7: 1722189-1724148 Capsella rubella
Carub.0007s0458 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1722189-1723188 Capsella rubella
Carub.0007s0458 2.0kb upstream 2.0kb upstream 2960 true scaffold_7: 1723189-1726148 Capsella rubella
Carub.0007s0458 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1724149-1726148 Capsella rubella
Carub.0007s0458 2.0kb downstream 2.0kb downstream 2960 true scaffold_7: 1721189-1724148 Capsella rubella
Carub.0007s0458 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1721189-1723188 Capsella rubella
Carub.0007s0458 5.0kb upstream 5.0kb upstream 5960 true scaffold_7: 1723189-1729148 Capsella rubella
Carub.0007s0458 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1724149-1729148 Capsella rubella
Carub.0007s0458 5.0kb downstream 5.0kb downstream 5960 true scaffold_7: 1718189-1724148 Capsella rubella
Carub.0007s0458 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1718189-1723188 Capsella rubella
Carub.0007s0458 10.0kb upstream 10.0kb upstream 10960 true scaffold_7: 1723189-1734148 Capsella rubella
Carub.0007s0458 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1724149-1734148 Capsella rubella
Carub.0007s0458 10.0kb downstream 10.0kb downstream 10960 true scaffold_7: 1713189-1724148 Capsella rubella
Carub.0007s0458 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1713189-1723188 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373731 5261 Brassicaceae View MSA
123837110 5264 Brassicales-Malvales View MSA
124322243 5266 SBM View MSA
124249999 5268 Malvidae View MSA
124040372 5270 Rosid View MSA
123745772 5271 Pentapetalae View MSA
122771644 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain