Gene : Carub.0007s0487 C. rubella v1.1
Defline:  (1 of 3) K00384 - thioredoxin reductase (NADPH) (trxB) Genomic Order:  487
Name:  ? Carub.0007s0487 Secondary Identifier:  ? PAC:39233526
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0487 0.5kb upstream 0.5kb upstream 2242 true scaffold_7: 1822626-1824867 Capsella rubella
Carub.0007s0487 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1824368-1824867 Capsella rubella
Carub.0007s0487 0.5kb downstream 0.5kb downstream 2242 true scaffold_7: 1822126-1824367 Capsella rubella
Carub.0007s0487 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1822126-1822625 Capsella rubella
Carub.0007s0487 1.0kb upstream 1.0kb upstream 2742 true scaffold_7: 1822626-1825367 Capsella rubella
Carub.0007s0487 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1824368-1825367 Capsella rubella
Carub.0007s0487 1.0kb downstream 1.0kb downstream 2742 true scaffold_7: 1821626-1824367 Capsella rubella
Carub.0007s0487 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1821626-1822625 Capsella rubella
Carub.0007s0487 2.0kb upstream 2.0kb upstream 3742 true scaffold_7: 1822626-1826367 Capsella rubella
Carub.0007s0487 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1824368-1826367 Capsella rubella
Carub.0007s0487 2.0kb downstream 2.0kb downstream 3742 true scaffold_7: 1820626-1824367 Capsella rubella
Carub.0007s0487 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1820626-1822625 Capsella rubella
Carub.0007s0487 5.0kb upstream 5.0kb upstream 6742 true scaffold_7: 1822626-1829367 Capsella rubella
Carub.0007s0487 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1824368-1829367 Capsella rubella
Carub.0007s0487 5.0kb downstream 5.0kb downstream 6742 true scaffold_7: 1817626-1824367 Capsella rubella
Carub.0007s0487 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1817626-1822625 Capsella rubella
Carub.0007s0487 10.0kb upstream 10.0kb upstream 11742 true scaffold_7: 1822626-1834367 Capsella rubella
Carub.0007s0487 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1824368-1834367 Capsella rubella
Carub.0007s0487 10.0kb downstream 10.0kb downstream 11742 true scaffold_7: 1812626-1824367 Capsella rubella
Carub.0007s0487 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1812626-1822625 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371947 5261 Brassicaceae View MSA
123840179 5264 Brassicales-Malvales View MSA
124343686 5266 SBM View MSA
124249529 5268 Malvidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain