Gene : Carub.0007s0500 C. rubella v1.1
Defline:  (1 of 2) 2.7.1.39 - Homoserine kinase Genomic Order:  500
Name:  ? Carub.0007s0500 Secondary Identifier:  ? PAC:39235667
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HOMOSER-THRESYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  
Crubella PWY-702 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  
Crubella THRESYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0500 0.5kb upstream 0.5kb upstream 1616 true scaffold_7: 1867454-1869069 Capsella rubella
Carub.0007s0500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1868570-1869069 Capsella rubella
Carub.0007s0500 0.5kb downstream 0.5kb downstream 1616 true scaffold_7: 1866954-1868569 Capsella rubella
Carub.0007s0500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1866954-1867453 Capsella rubella
Carub.0007s0500 1.0kb upstream 1.0kb upstream 2116 true scaffold_7: 1867454-1869569 Capsella rubella
Carub.0007s0500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1868570-1869569 Capsella rubella
Carub.0007s0500 1.0kb downstream 1.0kb downstream 2116 true scaffold_7: 1866454-1868569 Capsella rubella
Carub.0007s0500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1866454-1867453 Capsella rubella
Carub.0007s0500 2.0kb upstream 2.0kb upstream 3116 true scaffold_7: 1867454-1870569 Capsella rubella
Carub.0007s0500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1868570-1870569 Capsella rubella
Carub.0007s0500 2.0kb downstream 2.0kb downstream 3116 true scaffold_7: 1865454-1868569 Capsella rubella
Carub.0007s0500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1865454-1867453 Capsella rubella
Carub.0007s0500 5.0kb upstream 5.0kb upstream 6116 true scaffold_7: 1867454-1873569 Capsella rubella
Carub.0007s0500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1868570-1873569 Capsella rubella
Carub.0007s0500 5.0kb downstream 5.0kb downstream 6116 true scaffold_7: 1862454-1868569 Capsella rubella
Carub.0007s0500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1862454-1867453 Capsella rubella
Carub.0007s0500 10.0kb upstream 10.0kb upstream 11116 true scaffold_7: 1867454-1878569 Capsella rubella
Carub.0007s0500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1868570-1878569 Capsella rubella
Carub.0007s0500 10.0kb downstream 10.0kb downstream 11116 true scaffold_7: 1857454-1868569 Capsella rubella
Carub.0007s0500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1857454-1867453 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343765 5261 Brassicaceae View MSA
123783869 5264 Brassicales-Malvales View MSA
124282079 5266 SBM View MSA
124249755 5268 Malvidae View MSA
124063769 5270 Rosid View MSA
123740380 5271 Pentapetalae View MSA
122792807 5272 Eudicot View MSA
122044756 5273 Angiosperm View MSA
121343956 5274 Embryophyte View MSA
123424273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain